| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2223 |
|---|
| Symbol | |
|---|
| ID | 4181537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 2371352 |
|---|
| End bp | 2372725 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638068120 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_674780 |
|---|
| Protein GI | 110634572 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.450879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGA CGTGGTTGTC GCTGCTGGTG CCGATGGCCG TTCTGGGCGC AGCCATCTGG
GGAGGGAGGC GCGCGGGCTT CCTGGTCTTG GCCGTCGGCG CCGCCTTTCT CGCGGCAGGC
GCAGCTGGGG TGATGGCGAA CTTCAGCGCC GTGCCGGCGC TTTTGTCGTT TTTGTTCTCC
GCCGCGTTGG TCTTCGTCGG CTCCGGCTAC CGTGACGCCA GGAAAATCGC TCGTGGCGCG
CAGGAACAGC TCGATGCGCG TGAAGCCCAT CTTCGCTCCA TTCTGGATAC GGTGCCGGAC
GCGACGGTGG TCATTGATGT GCAGGGCACG ATGATCTCTT TCAACCGCGC TGCCGTTCGC
CAGTTCGGCT ATTCGGAAGC CGAAGCGGTA GGGCAGAACG TCAAGATCCT GATGCCGGAG
CCTTACCAGG GCGAACATGA CGGCTACATC CACCGCTATC TGACAACCGG CGAGCGGCGG
ATCATCGGGA TCGACCGTGT CGTCGTCGGG CGGCGGAAGG ACGGCTCGAC CTTCCCCATG
AAGCTTGCGG TGGGTGAGAT GAAGAGCGGT GGCCAGGTGT TCTTCACTGG CTTCATCCGC
GACCTGACGG AAAGGGCCGA GTCGGAGGCG AGACTGGAGG AGATCCAGGC AGAGCTCGCG
CGCCTGGCGC GTCTGAACGA ACTGGGAGAA ATGGCCTCGA CCCTCGCACA CGAGCTCAAC
CAGCCGCTTT CGGCCATCGC TAACTATGTG CAGGGGTGTA GCCGGCTTCT AAAGAACATG
GATGATGCGC TGGCCTCACG TATGCGCGAG GCGCTGGATG AGACCGCTCG CCAGACGCTG
CGCGCCGGGC AGATCATTCG CCACCTACGC GAGTTCGTCA CCAGGGGCGA GACCGAAAAG
CAGCCGGAAG ACCTCCATAA GCTCGTCGAG GAGGCCGGCG CTCTCGCCCT CGTCGGCTCG
CGCGAATTGG GTGTGCGGAC GGTGTTCGAC TTCAAGGCCG GCCCGAAGGT GGTTCTGGTT
GACCGTGTCC AGATACAGCA GGTGCTGATC AACCTTATGC GCAACGCCAT GGAAGCCATG
AAGGAGAGCG AAGCCCGCGA GTTGGTGGTA CGAATCATGC AGGGCGAAGG CGATGAAGCG
GTGGTGGAAG TTTCCGACAC GGGCTCAGGC GTGCCGGACG ACGTGGTGGC ACAGCTATTC
CAGCCCTTCG TCACCACTAA GCCCGGCGGG ATGGGAATAG GGCTCTCCAT ATCGAAGCGG
ATCATCGAGG CTCACGGGGG CGAACTGATC ATGCAGCGGA ACGAGAAGGG TGGCGCGACC
TTCCGCTTCA CCCTGCCGGC CGGAAAAGAG CAGGAGCCGG AAAATGAGCG GTGA
|
|---|
| Protein sequence | MDQTWLSLLV PMAVLGAAIW GGRRAGFLVL AVGAAFLAAG AAGVMANFSA VPALLSFLFS
AALVFVGSGY RDARKIARGA QEQLDAREAH LRSILDTVPD ATVVIDVQGT MISFNRAAVR
QFGYSEAEAV GQNVKILMPE PYQGEHDGYI HRYLTTGERR IIGIDRVVVG RRKDGSTFPM
KLAVGEMKSG GQVFFTGFIR DLTERAESEA RLEEIQAELA RLARLNELGE MASTLAHELN
QPLSAIANYV QGCSRLLKNM DDALASRMRE ALDETARQTL RAGQIIRHLR EFVTRGETEK
QPEDLHKLVE EAGALALVGS RELGVRTVFD FKAGPKVVLV DRVQIQQVLI NLMRNAMEAM
KESEARELVV RIMQGEGDEA VVEVSDTGSG VPDDVVAQLF QPFVTTKPGG MGIGLSISKR
IIEAHGGELI MQRNEKGGAT FRFTLPAGKE QEPENER
|
|---|
| |