Gene Meso_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2158 
Symbol 
ID4182470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2308314 
End bp2309033 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content60% 
IMG OID638068054 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_674715 
Protein GI110634507 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCTCC TTGCTGGGCT CGGCAATCCG GGTCCGCAAT ACCAAAACCA CCGGCACAAT 
GTCGGCTTCA TGGCGGCGGA TGCTATTTTT CGCCGCCATT CCTTTTCGCC CTGGTCGAAA
AAATTCAGCG CGCTCGTAGC CGAAGGCAGG GTCGGCACCG AAAAACTGCT GCTCGTGAAG
CCGCAGACCT TCATGAACCT TTCCGGCCAG GCTGTCGGCG AGGCCATGCG CTTTTACAAG
CTTCAGCCGT CCGACATAAT TGTATTTTAC GACGAGCTTG ATCTTGCTCC CGGCAAGGTG
CGAGTGAAGC GCGGCAGCGG CAGCGGCGGC CACAATGGCA TTAAATCCAT TGACGCCCAT
TGCGGTCAGG ATTACCGCCG CGTGCGCATC GGCATCGGCC ATCCAGGTGA TAAGGCGCGG
GTTACGCCCC ATGTGCTCGG CGATTTTGCC AAGGCCGATC ATGCCTGGCT CGATCCGCTG
CTCGATGCGA TGGCGGAAAA TGTCGATTTG CTCATCACGG GCGACGAGTC CGGCTTCATG
AACAAGGCCA GCCTAGCCGT GCAGGGTAAG GCTGCGGACA TCGAGATGGC CGGCGAGAAA
CCGGCTCAGA AGGGGCGCAG CCACATCCGC CAGGCGCGGC CAAAGGCGCC GCCGGCGGAA
CTTCCATCAA GCGGCCCGAT GGCCGCCATG CTGAAGAAGC TCTTCGGCGG TAAAGAATAA
 
Protein sequence
MLLLAGLGNP GPQYQNHRHN VGFMAADAIF RRHSFSPWSK KFSALVAEGR VGTEKLLLVK 
PQTFMNLSGQ AVGEAMRFYK LQPSDIIVFY DELDLAPGKV RVKRGSGSGG HNGIKSIDAH
CGQDYRRVRI GIGHPGDKAR VTPHVLGDFA KADHAWLDPL LDAMAENVDL LITGDESGFM
NKASLAVQGK AADIEMAGEK PAQKGRSHIR QARPKAPPAE LPSSGPMAAM LKKLFGGKE