Gene Meso_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2140 
Symbol 
ID4182452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp2293635 
End bp2294603 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content60% 
IMG OID638068036 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_674697 
Protein GI110634489 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0846884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCGGC ATAATCCGGT TTTCGCCCGC ACTTGTGGGT TTTTTCCAGG GCAAAGGGCC 
CGAAGGAGAC TTAGGATGGC ATCTGTTCCT TTCGATCAGC TGGATGGCTT CATCTGGATG 
AACGGCGAGT TCGTAGAGTG GGCGGATGCC AAGATTCACG TGCTCACCCA CGGCCTGCAT 
TACGCAAGCG CCGTATTCGA GGGCGAGCGC GCCTATGGCG GGCAGATCTT CAAGCTGACT 
GAGCATTCGG AGCGGCTGCA CGAATCCGCG CGCGTCATGG GGTTCCGCAT TCCCTACACG 
GTCGCCGAGA TCGATGAGGC ATGCCGGCAG CTTCTCGCCA AGCAAGGGCT GCAAGACGCC 
TATGTGCGTC CGATCGCCTG GCGCGGCAGC GAGATGATGG GCGTTTCAGC TCAGAACAAC 
CGCATCAATC TCGCAATCGC CATCTGGGAA TGGCCGAGCT ATTTCAACCC CGAACAGCGG 
CTCAAGGGCA TTCGCCTCGA TATGGCCGAA TACCGCCGGC CGGATCCGCG TACGGCGCCT 
TGGAAAGCGA AGGCCGCGGG GCTTTATATG ATCTGCACGC TTTCCAAGCA TGCGGCGGAG 
GCTAAGGGCT ACAGTGATGC GCTGATGCTT GATTGGCGCG GACAGGTGGC TGAGGCCACC 
GGCGCCAATG TCTTTTTCGT CAAGGACGGA AAGCTGCATA CGCCGGCTCC CGATTGCTTC 
CTGGATGGAA TCACCCGGCG CACCGTGATC GATCTGGCGC GCCGGCGCGG CATCGAGGTG 
GTTGAAAGGG CGATCCAGCC GGAGGAGCTG ACGGGCTTTG AACAATGCTT CCTCACGGGA 
AGCGCGGCGG AGGTGACGCC TGTCTCCGAG ATCGGGCCTT ATAACTTCCA AGTGGGTGAA 
ATCACTCGCG TTTTGATGGA GGATTACTCC GAGGAAGTGC GCCCGAGGCA GCGTCTCGCA 
GCAGAATAA
 
Protein sequence
MFRHNPVFAR TCGFFPGQRA RRRLRMASVP FDQLDGFIWM NGEFVEWADA KIHVLTHGLH 
YASAVFEGER AYGGQIFKLT EHSERLHESA RVMGFRIPYT VAEIDEACRQ LLAKQGLQDA 
YVRPIAWRGS EMMGVSAQNN RINLAIAIWE WPSYFNPEQR LKGIRLDMAE YRRPDPRTAP 
WKAKAAGLYM ICTLSKHAAE AKGYSDALML DWRGQVAEAT GANVFFVKDG KLHTPAPDCF 
LDGITRRTVI DLARRRGIEV VERAIQPEEL TGFEQCFLTG SAAEVTPVSE IGPYNFQVGE 
ITRVLMEDYS EEVRPRQRLA AE