Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2102 |
Symbol | |
ID | 4182590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 2256069 |
End bp | 2259089 |
Gene Length | 3021 bp |
Protein Length | 1006 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638067998 |
Product | outer membrane autotransporter |
Protein accession | YP_674659 |
Protein GI | 110634451 |
COG category | [S] Function unknown |
COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTGT TCGAGACCCT GTCGAAGGGC GTCAGCTCTG CCGCAATCTG CGCATGCATT GCGACTCTCC CCGGCAATCT GCATGCGCAG ACTGAGGAGG CCTATCGGCT CGAATTCGAT GCAAGCTGGT ATCTCAGCGC TATCAACGCC GAAGCGGCCT ATAAGCGGGG CTATGATGGC CGCGGCATAC TCGTGGCTGT GGTCGATTCT GGTCTCGACA TTCACCACCC CGAATTTTTC GGCCGGATTT CACCTCTGTC CTACTCCTTC CTGGATATCG ACCCTCTGAA CGTTTTCGAC CCGGACGGCC ACGGCACGCA TGTGGCCGGC ATAATCGGCG CCGCCCGCAA CGGAATCGGC AATATGGGCG TTGCCTATGG CGCAGAACTC ATGGCCTTGA AGGCCATCGG AGATGCGGAG CCCGGGAGCG AGAAAGGACC ATTCGTTTCG CCTGATAACA ATGCGCTTTT CTACGCGGCC AGCAATGGTG CGAAGGTGAT AAACGGCAGC TACGGCCCAC CTGCCTTTCC GTCCCCGGAC TTGGATGACG AAAACGAGAA CCCCAATTAT CGTGTCATGC CGCGCCCCAT CGTCCAGTCC ATGGAGGGGA CAGATTATAG GGAGGACGCC GTGGCGGTGA GCGCCGCGGC AAATGCCGAT GTCGTTCTCG TCTTTGCTGC GGGTAACGAA TTCGAGGAGC AGCCGGACCA GGCGGCAAAC CCAACAGGAA TTGGCTTCCT ACCGCTGATC ACGGCAGAAA ATCTGCGTGC GGGTGTCTTC GACATCTTGA TAGACGCGAC GGACATAGAT GATCCGGACA CCTATGACTA CGCCGATCCT CTGGACCCTG AGTTCGACGA TCTCGATCTC TCGGATCTCG CCGGCTCCCT GATCGCCGTG GTCGCCACGG GCCGGGATGG AACCATTGCC GGCTATAGCA ACCGCTGCGG GCTGGCATGG CAATGGTGCC TTGCCGCACC CGGCGGTGAT TCCCCGAAAC CGGGGCAAAC GATTGAATAC TCCGCAATTA TCTCCACGCT TCCCGGCGGC AATTACGGCC CGAAAGCCGG GACATCAATG GCAAGCCCGG TAGTTGCCGG CGGCGCCGCA GTGCTCCGCC AGGCCTTTCC CTATATGACC GCGCGCCAGA TCATCGAACT GATTCTGACC ACCGCCCGGC CCATCGGTCC GCAAGAGATC TATGGCAGAG GCATGTTTGA CCTCGGCCGG GCGGTCCTCG GCCCCAAATA TTTCGGCGAT CCGCTCTTCG GCCCGACTTT CGATGTCAAT ACCAGAGGGT ACAACTCGGT ATGGGAAGGC GATATCTCCG GCCCGGGCGG TCTGATCAAG CGCGGAGCAG GCAACCTGAT CCTTCTCGGC GTGAACACCT ATAGCGGCGG CACAAGAGTG TTCGGCGGCG AGCTTACGCT CCTGGGCTCA CTCGGCTCCG ACGTTGAGGT CCTTACCGGC GCCACGCTGC GCGGCGACCG CTCGATGATC GCCGGGGACT TGACGACGTC CGGGACGCTT GCCCCGGGCA TTGCCGACGG CTACGTCGGC GAGATGCTGG TTAATGGAGA TGTCTCGCTT TCCGCTGCCT CGACGTACCG CATCGATGTG GCGGGAGACC TGGCGGATCA GCTGAATGTC ATGGACATGC CGCAACTCAG GGAGGATCCA GACACGCAAA AGGGTTCCGT CACTCTCGAA AGCGGCACTA TAGATATCAG GCTGAAGGAC GGCCTCGCGC CCTTGGTTCC ACTCGACATC ATCACTGCTC AGAACGGCGT CAGCGGAACT TTTGGCTCGA TCACGACCAA CAGCATATCC CCTTTCCTCG ACCCCTATCT GTTCTACGGC GATGCCGTTA CGCTCTCTTT CGTGCCGAAC GGGACGACCC TGGCCAGCGC AGCGACCTCG CCGAACCAAT CAGCTGTCGC AAACGCGCTC GACCATGCGC CATACGCAAC GGCATGGAAG CATGTCTCCC GACAGAGCCT GGATGGAGCG CGAAAGGCCT TCGACCAGCT CTCCGGCGAG ATCTATGCAA CCCAGAAAAC GGCCATTGTC GAGGGCAGCC GCAATGTGCG CGACGCGGCA AACGACCGCT TGCGCAGCGC TACTGGCGGC GCGGGAGCGC TCAGCCTGCC CATTTTGGCC TATGGGCCGG ACGGCACGGA GGCGAGCCCG TCGAACAGTG AACGGTTTAC CGTCTGGAGC GCCGCCTATG GCGGATGGGG TCATTTGGAT GCCGACGGCA ATGCCGCCGC TCTGGAAAGC GGCAGCGGTG GCTTCCTCAT GGGCGGCGAC CTGCCGGTCG GCGATGGATG GCGGGTCGGC ATGCTCACAG GAATGGGCTG GGGTGATTAT TCGGTCGATG ATCGATCCTC CACCACCGAT ATGAAAGGCT ATCATTTAGG GCTCTATGGC GGCGGGGTCT TGAACGCATT GGGTCTCCGC GCAGGCTTGG CCTATAGCTG GCTGAACCTT GAAACCTGGC GCAAGATCGA TTTTCCCGGG CTGAAGGAAC AGCTCAATGC CGAGTATCAC GGCGGCTTGT TCCAGGCTTT CGGCGAAGTC TCATGGAAGG TGGACAAGGA GGAATTCAAA TTCGAGCCGT TCGTCAATCT GGCTCATGTG ACCCTGCGGA CCGGCGCATT CAGCGAAGGC GGCACTGTGG GGCTCTCGTC TCAAAGGGAG ACGTTCAACA CGACCTCAGC AACCACAGGG CTTCGCGCTT CTATGGAATT GGAGAAGCTG CCGGTTCCTG CAAAGCTCAA TGCAAGCGTC GGGTGGCGGC ATGCCCTGGG CGGCAAAAGC CCGACATCCG AGCTTAAGCT TGACGGTGTT CCAAGCTTTA CGACGACGGG CCTGCCGCGC GTCAGGAACG AAGCGGTTCT AGGTGTCAGG CTCGATCTTG GCGTGGCCGA AAGGGCGACG ATGAGCGTTT CCTATAATGG CAGTTTCAGC GCAGACGCTC GAACGAATAC CTTTGATGCG CGCCTGAAAA TACGTTTCTA A
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Protein sequence | MNVFETLSKG VSSAAICACI ATLPGNLHAQ TEEAYRLEFD ASWYLSAINA EAAYKRGYDG RGILVAVVDS GLDIHHPEFF GRISPLSYSF LDIDPLNVFD PDGHGTHVAG IIGAARNGIG NMGVAYGAEL MALKAIGDAE PGSEKGPFVS PDNNALFYAA SNGAKVINGS YGPPAFPSPD LDDENENPNY RVMPRPIVQS MEGTDYREDA VAVSAAANAD VVLVFAAGNE FEEQPDQAAN PTGIGFLPLI TAENLRAGVF DILIDATDID DPDTYDYADP LDPEFDDLDL SDLAGSLIAV VATGRDGTIA GYSNRCGLAW QWCLAAPGGD SPKPGQTIEY SAIISTLPGG NYGPKAGTSM ASPVVAGGAA VLRQAFPYMT ARQIIELILT TARPIGPQEI YGRGMFDLGR AVLGPKYFGD PLFGPTFDVN TRGYNSVWEG DISGPGGLIK RGAGNLILLG VNTYSGGTRV FGGELTLLGS LGSDVEVLTG ATLRGDRSMI AGDLTTSGTL APGIADGYVG EMLVNGDVSL SAASTYRIDV AGDLADQLNV MDMPQLREDP DTQKGSVTLE SGTIDIRLKD GLAPLVPLDI ITAQNGVSGT FGSITTNSIS PFLDPYLFYG DAVTLSFVPN GTTLASAATS PNQSAVANAL DHAPYATAWK HVSRQSLDGA RKAFDQLSGE IYATQKTAIV EGSRNVRDAA NDRLRSATGG AGALSLPILA YGPDGTEASP SNSERFTVWS AAYGGWGHLD ADGNAAALES GSGGFLMGGD LPVGDGWRVG MLTGMGWGDY SVDDRSSTTD MKGYHLGLYG GGVLNALGLR AGLAYSWLNL ETWRKIDFPG LKEQLNAEYH GGLFQAFGEV SWKVDKEEFK FEPFVNLAHV TLRTGAFSEG GTVGLSSQRE TFNTTSATTG LRASMELEKL PVPAKLNASV GWRHALGGKS PTSELKLDGV PSFTTTGLPR VRNEAVLGVR LDLGVAERAT MSVSYNGSFS ADARTNTFDA RLKIRF
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