Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2081 |
Symbol | |
ID | 4182651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 2233031 |
End bp | 2234812 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638067978 |
Product | TrkA-C |
Protein accession | YP_674639 |
Protein GI | 110634431 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTACGT TGCCGCAGAT CCTCTCCTTC ACGGTGATCG GCCTGGCCAT GGCGGCCTTC ATATGGGGCC GCTTCCGCTA TGACCTTGTC GGCGCGCTCG CCCTCCTGGC GGGCGTTGCG GTCGGCATCG TGCCGGTCGA TCGCGCCTTC AGCGGCTTCA GCGACGACAT CGTCATCATT GTCGGCAGCG CGCTCCTGGT CAGCGCGGCG GTGGCGCGCA GCGGCATCCT TGAACTGACC ATCCACCGCT ATGCACCAAC AGTAACGTCG GTGCGCGCTC AGGTGGCGCT GCTGGTGCTC ACCGTCGCCT TCATGTCGGC TTTCGTGAAA AATATCGGGG CGCTGGCGAT CATGATCCCG GTCGCGTTCC AATTCGCGCG GCGCTCGAAT ACCAGCGCTT CCACTTTCCT GATGCCGATG GCCTTTGCGT CCCTGCTGGG CGGGCTGATG ACCCAGATCG GCACCTCACC CAACATCCTG GTATCCCGCC TGCGCGGCGA CATCACCGGC ACGCCTTTCA CGATGTTCGA TTTCACGCCG GTGGGCTTCG CGCTCACCAT CGCGGGTTCC ATTTTTCTCA TTCTATTCTA TTGGCTCCTG CCGACGCGTG AGCGCAAGGA CAGCTCTCTC CAGGAAGCGA TCGTCATCAA GAATTACGTG GCCGAAGCCC GGGTGGCGAA GGAATCCACG GTGGTCAACA AGACGCTTGG CGACCTCCTC AAGATCTCGG CCGGGGACGT TGCCATCACA AACGTCCTGC GCGCCGACGG CCTGCGCATT GCGCCGCTGC CGGATGCGGT GCTGCGCGAC GGCGATATCC TGCTCATGGA AGGCGAGCAC GAAGCGCTCG ATCGCCTCAT CGCCCAGGCC AAGCTGAAGA TTTCGAGTGA CAGGGACGTG GCAAATGGCG GTGATCCCGC CTTCGAGGTC ACGGCCATCG AGGCTGTCGT CGGCGAAAAC TCAAATCTCA TCGGCTGGTC GGCCCAGTCG CTCCTGCTCT ACGACCGGTT CAATGTGAAT CTGCTAGCGG TGAGCCGCCA GGGCGAGCGC CTCAACCAGC GCGTGGGCAC GATCACCCTG CGCCTTGGCG ATGTGGTCGT GCTTCAGGGC AACCAGAAGT CCCTGCCGGA GTTCCTGCGC GATTTCGGTT TGCTGCCGTT GGCCGAGCGC CCCCTGCTGC TGGGCAGTGT GCGGCGTGGT GTGGTCCCCC TTCTCATCCT GTTTGCCGCC ATCGGCGCCA CCGCCATCGG CGCTGTGCCC GTGCATCTCG CCTTCTTCAC GGCCGCCGTA ATGATGGTGC TTTTCCGCGT CATCCCCGTG CGCAATGTAT ATAGCGCGAT CGACGGTCCC ATCCTGGTGA TGCTTGCCAC ACTCATCCCT GTCAGCGATA CGCTGCGCGC CACGGGCGCG ACCGACATCA TAGCCTCGAA TCTTGCAGGT ATCGGCGCGC TTCTGCCCAG CTACGGCGCT CTGGCGCTCA TCATGGTGGC GGCCATGGCG GTCACCCCGT TCCTCAACAA CGCCGCGACG GTGCTCGTAA TGGCGCCGAT TGCCGCCGGC TTCGCCACCA CCCTCGGCTA CAGGCCGGAA GCTTTCCTGA TGGCCATCGC CATCGGCGCC GGTTGCGACT TCCTCACCCC CATCGGCCAT CAGTGCAATA CACTGGTCAT GGGTCCCGGC GGCTACCGCT TCTCCGACTA TCCGCGGCTC GGCCTTCCCC TCTCGATCAT CGTTATTCTG GTCGCGGTGC CGACGCTGAT GGTGGTCTGG CCGCTGCAAT AG
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Protein sequence | MLTLPQILSF TVIGLAMAAF IWGRFRYDLV GALALLAGVA VGIVPVDRAF SGFSDDIVII VGSALLVSAA VARSGILELT IHRYAPTVTS VRAQVALLVL TVAFMSAFVK NIGALAIMIP VAFQFARRSN TSASTFLMPM AFASLLGGLM TQIGTSPNIL VSRLRGDITG TPFTMFDFTP VGFALTIAGS IFLILFYWLL PTRERKDSSL QEAIVIKNYV AEARVAKEST VVNKTLGDLL KISAGDVAIT NVLRADGLRI APLPDAVLRD GDILLMEGEH EALDRLIAQA KLKISSDRDV ANGGDPAFEV TAIEAVVGEN SNLIGWSAQS LLLYDRFNVN LLAVSRQGER LNQRVGTITL RLGDVVVLQG NQKSLPEFLR DFGLLPLAER PLLLGSVRRG VVPLLILFAA IGATAIGAVP VHLAFFTAAV MMVLFRVIPV RNVYSAIDGP ILVMLATLIP VSDTLRATGA TDIIASNLAG IGALLPSYGA LALIMVAAMA VTPFLNNAAT VLVMAPIAAG FATTLGYRPE AFLMAIAIGA GCDFLTPIGH QCNTLVMGPG GYRFSDYPRL GLPLSIIVIL VAVPTLMVVW PLQ
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