Gene Meso_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2081 
Symbol 
ID4182651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2233031 
End bp2234812 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content64% 
IMG OID638067978 
ProductTrkA-C 
Protein accessionYP_674639 
Protein GI110634431 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTACGT TGCCGCAGAT CCTCTCCTTC ACGGTGATCG GCCTGGCCAT GGCGGCCTTC 
ATATGGGGCC GCTTCCGCTA TGACCTTGTC GGCGCGCTCG CCCTCCTGGC GGGCGTTGCG
GTCGGCATCG TGCCGGTCGA TCGCGCCTTC AGCGGCTTCA GCGACGACAT CGTCATCATT
GTCGGCAGCG CGCTCCTGGT CAGCGCGGCG GTGGCGCGCA GCGGCATCCT TGAACTGACC
ATCCACCGCT ATGCACCAAC AGTAACGTCG GTGCGCGCTC AGGTGGCGCT GCTGGTGCTC
ACCGTCGCCT TCATGTCGGC TTTCGTGAAA AATATCGGGG CGCTGGCGAT CATGATCCCG
GTCGCGTTCC AATTCGCGCG GCGCTCGAAT ACCAGCGCTT CCACTTTCCT GATGCCGATG
GCCTTTGCGT CCCTGCTGGG CGGGCTGATG ACCCAGATCG GCACCTCACC CAACATCCTG
GTATCCCGCC TGCGCGGCGA CATCACCGGC ACGCCTTTCA CGATGTTCGA TTTCACGCCG
GTGGGCTTCG CGCTCACCAT CGCGGGTTCC ATTTTTCTCA TTCTATTCTA TTGGCTCCTG
CCGACGCGTG AGCGCAAGGA CAGCTCTCTC CAGGAAGCGA TCGTCATCAA GAATTACGTG
GCCGAAGCCC GGGTGGCGAA GGAATCCACG GTGGTCAACA AGACGCTTGG CGACCTCCTC
AAGATCTCGG CCGGGGACGT TGCCATCACA AACGTCCTGC GCGCCGACGG CCTGCGCATT
GCGCCGCTGC CGGATGCGGT GCTGCGCGAC GGCGATATCC TGCTCATGGA AGGCGAGCAC
GAAGCGCTCG ATCGCCTCAT CGCCCAGGCC AAGCTGAAGA TTTCGAGTGA CAGGGACGTG
GCAAATGGCG GTGATCCCGC CTTCGAGGTC ACGGCCATCG AGGCTGTCGT CGGCGAAAAC
TCAAATCTCA TCGGCTGGTC GGCCCAGTCG CTCCTGCTCT ACGACCGGTT CAATGTGAAT
CTGCTAGCGG TGAGCCGCCA GGGCGAGCGC CTCAACCAGC GCGTGGGCAC GATCACCCTG
CGCCTTGGCG ATGTGGTCGT GCTTCAGGGC AACCAGAAGT CCCTGCCGGA GTTCCTGCGC
GATTTCGGTT TGCTGCCGTT GGCCGAGCGC CCCCTGCTGC TGGGCAGTGT GCGGCGTGGT
GTGGTCCCCC TTCTCATCCT GTTTGCCGCC ATCGGCGCCA CCGCCATCGG CGCTGTGCCC
GTGCATCTCG CCTTCTTCAC GGCCGCCGTA ATGATGGTGC TTTTCCGCGT CATCCCCGTG
CGCAATGTAT ATAGCGCGAT CGACGGTCCC ATCCTGGTGA TGCTTGCCAC ACTCATCCCT
GTCAGCGATA CGCTGCGCGC CACGGGCGCG ACCGACATCA TAGCCTCGAA TCTTGCAGGT
ATCGGCGCGC TTCTGCCCAG CTACGGCGCT CTGGCGCTCA TCATGGTGGC GGCCATGGCG
GTCACCCCGT TCCTCAACAA CGCCGCGACG GTGCTCGTAA TGGCGCCGAT TGCCGCCGGC
TTCGCCACCA CCCTCGGCTA CAGGCCGGAA GCTTTCCTGA TGGCCATCGC CATCGGCGCC
GGTTGCGACT TCCTCACCCC CATCGGCCAT CAGTGCAATA CACTGGTCAT GGGTCCCGGC
GGCTACCGCT TCTCCGACTA TCCGCGGCTC GGCCTTCCCC TCTCGATCAT CGTTATTCTG
GTCGCGGTGC CGACGCTGAT GGTGGTCTGG CCGCTGCAAT AG
 
Protein sequence
MLTLPQILSF TVIGLAMAAF IWGRFRYDLV GALALLAGVA VGIVPVDRAF SGFSDDIVII 
VGSALLVSAA VARSGILELT IHRYAPTVTS VRAQVALLVL TVAFMSAFVK NIGALAIMIP
VAFQFARRSN TSASTFLMPM AFASLLGGLM TQIGTSPNIL VSRLRGDITG TPFTMFDFTP
VGFALTIAGS IFLILFYWLL PTRERKDSSL QEAIVIKNYV AEARVAKEST VVNKTLGDLL
KISAGDVAIT NVLRADGLRI APLPDAVLRD GDILLMEGEH EALDRLIAQA KLKISSDRDV
ANGGDPAFEV TAIEAVVGEN SNLIGWSAQS LLLYDRFNVN LLAVSRQGER LNQRVGTITL
RLGDVVVLQG NQKSLPEFLR DFGLLPLAER PLLLGSVRRG VVPLLILFAA IGATAIGAVP
VHLAFFTAAV MMVLFRVIPV RNVYSAIDGP ILVMLATLIP VSDTLRATGA TDIIASNLAG
IGALLPSYGA LALIMVAAMA VTPFLNNAAT VLVMAPIAAG FATTLGYRPE AFLMAIAIGA
GCDFLTPIGH QCNTLVMGPG GYRFSDYPRL GLPLSIIVIL VAVPTLMVVW PLQ