Gene Meso_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2078 
Symbol 
ID4182970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2230173 
End bp2230919 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID638067975 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_674636 
Protein GI110634428 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACCC TCTATCGCCT CCTGGCCCTC GCGCTTTTTC TTTTCATCTG GTGGGCCGCA 
TCGTTCGCGG TCGGCCCGAA CCTGGTCCCG ACGCCGCTCA GCACGGCATC GGCCGCGCTC
GAATTGATGC GCGACGGGAA AATTTCCGAG CCGCTGCTCA GCAGCCTGAC CATTTATTTC
ACCGGCTACC TACTGGCTGT CATCGTTGGC ATTCCAATCG GAATGCTGAT GGGCGGCATA
CGCGATCTCG GCCGCACCCT GGACATCTAT GTAAGCGCGC TTATGGCGAC CCCGCGCGTG
GCCTTCATCC CGCTTATCAT CCTTTTTCTT GGTCTCGGTC CTGAGGCCAA GATCGCGGTC
GTCTTTCTCG GCGCCGTTAT TCCCATCCTG ATCGGCACCT ATTCCGGCAT CCTCAACAGC
GATGCCGAGC TCATCGAAAT GGCGCGCTCG ATGGGCGCGA CGCGCTCTCA GATCTATTGG
CGCATCATGC TTCCAGGCGC GCTCGGCTTC GTGGTGATGG GGCTGCGGAT CGGTGCCACA
ATCGGATTGA TCAACACGGT CGTTGCCGAG CTCTACACGG CCGCCAGCGG GTTGGGCGGG
TTGCTAGCGC TTTATGGAAA CACGTTTCAG ATGGCCCGCT ATTTCGTCGT GGTGCTGGCG
CTGGCGCTCA TCGGCGGTCT CGTGAGCCAA GGCCTGAGGG CGCTCGAAGC CTGGTCGGGC
CGCTGGCGCG TCACCGCCGG GAACTGA
 
Protein sequence
MITLYRLLAL ALFLFIWWAA SFAVGPNLVP TPLSTASAAL ELMRDGKISE PLLSSLTIYF 
TGYLLAVIVG IPIGMLMGGI RDLGRTLDIY VSALMATPRV AFIPLIILFL GLGPEAKIAV
VFLGAVIPIL IGTYSGILNS DAELIEMARS MGATRSQIYW RIMLPGALGF VVMGLRIGAT
IGLINTVVAE LYTAASGLGG LLALYGNTFQ MARYFVVVLA LALIGGLVSQ GLRALEAWSG
RWRVTAGN