Gene Meso_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2025 
Symbol 
ID4182937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2177103 
End bp2177894 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content61% 
IMG OID638067921 
Productglycoside hydrolase family protein 
Protein accessionYP_674583 
Protein GI110634375 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.390893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGA TGGCATTTTT GCTGACGTCG CTTCTGCTCG CCGGCTGTTC CAGCCTGAGC 
TACGATTTTT CCGATCTCGC CCCCTCCGCT TCGGCGCCGT CCGGCGGTCT GCGCTTTGCC
GACAACGACC CGCACGAGTG GGATGGCCGT GCGCCCTGGC ATTATCCGGT CCATGGCACG
GATGTTTCGA AATATCAGGG TGTGGTGGAC TGGCACGCCC TGAGACGGGG CGGAATTCAG
TTCGCCTTCA TCAAGGCGAC AGAGGGCGGC GACCGGGTGG ACGACATGTT CCACCGCAAC
TGGCAGGAAG CGCGGGCGGC GGGAATTCCA CGCAGCGCCT ACCACTTCTA TTACTTCTGC
CGGCCGGCGA TCGAGCAGGC GCGTTGGTTC ATATCGCATG TTCCAAGAGA TAATTCGGCG
CTCCCGCCCG TGCTGGACAT GGAGTGGAAC CATCTCTCCC CCTCTTGCAA GCTAAGGCCG
CCGGCCGAGA CGGTTCGCGC GGAAATGCAG GTTTTCCTCG ACATAATCGA ACGGCATTAC
GGCAAGCGCC CTATTATTTA CACATCTATC GATTTCTTCG ACGACAACGG CCTGTGGCGC
TTCAAGGGCT ATCCGTTCTG GCTGCGCTCG GTCGCCGGTC ATCCGGACGA GAAATATGAA
AACCACCCGT GGGTGTTTTG GCAATATACG GGAACGGGCG TGCTGCCCGG CATCAAGGGG
AACGCGGACA TCAACGTGTT CCACGGAAAT GCGGCAGCCT GGAGGGGCTG GCTCAAGGCC
CATGCCGGGT GA
 
Protein sequence
MRLMAFLLTS LLLAGCSSLS YDFSDLAPSA SAPSGGLRFA DNDPHEWDGR APWHYPVHGT 
DVSKYQGVVD WHALRRGGIQ FAFIKATEGG DRVDDMFHRN WQEARAAGIP RSAYHFYYFC
RPAIEQARWF ISHVPRDNSA LPPVLDMEWN HLSPSCKLRP PAETVRAEMQ VFLDIIERHY
GKRPIIYTSI DFFDDNGLWR FKGYPFWLRS VAGHPDEKYE NHPWVFWQYT GTGVLPGIKG
NADINVFHGN AAAWRGWLKA HAG