Gene Meso_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2012 
SymbolmurE 
ID4182805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2160073 
End bp2161524 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content64% 
IMG OID638067908 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 
Protein accessionYP_674570 
Protein GI110634362 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.413683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGG GCGAATTTGC CGATATCCTG CCGCTGAGCG GATCCATAGC GGGTGAAACG 
ACGATCTCCG GTCTTGCATC GGATTCCCGG CGGGTGAACG CCGGGGATCT TTTCTTTGCG
TTGCAAGGCT CAAAAGCCGA CGGCGCCGCC TATGCGGCTG ATGCCGCGGG CCGGGGCGCC
GTGGCCATCA TCGCCAGGCC GGGGACGGTT GGCGATGTCG GGGTGCCCGT CATCGAAGCC
GATGATCCCC GACATGTGCT GGCGCTTGCT TCAGCCCGGC TCTATGGCGC TCAGCCTGCC
ACTATGGTCG CAGTGACCGG AACCAGCGGG AAAACCTCGG TCGCCGCCTT CACGCGCCAG
ATCTGGGAGA AGGCGGGCCT TGCCGCCGCC TCGATCGGAA CCACCGGTGT CGTGGCCCCC
GGCCGCGATG AATATGGCGA GCTTACAACG CCCGATCCGG TCTCCCTTCA CAAGCTCCTG
CGCGAGCTTG CGGATGCGGG TGTCACCCAC GCCTCCATGG AGGCTTCGAG CCACGGGCTC
GACCAGCGCC GGCTCGACGG TGTGAAGCTT GCCGCGGGCG GCTTCACCAA TCTGGGCAGA
GACCATATGG ATTACCATCC AACGGTCGAG CACTATCATC AGTCTAAGAT GCGGCTGTTC
AAAACGCTGC TGCCAAAGGG CGCTCCTGCG GTCATCTTCG CCGACGATCC GTGGTCGGAA
CCTACGGAAA AGGTCGCTCT TGCGGCGGGC CTCCAACTTC TCACCGTCGG CCGCAGGGGA
ACCTTCCTGA CGATCAAGCG CGTAGAGCAC GAGCGTCACC GGCAAAGGAC GGAGATTGAA
CACGAGGGCA TGATCTATGA CATCATGCTG CCGCTCGCCG GCGATTTCCA GGTCGGCAAC
GCGCTCGTGG CGGCGGGGCT CGCCATCTCC ACGGGTCTTC CCGCCGACAA GGCCGTTGCG
GCGCTGGAGC ACCTGAAAGG TGCTTCCGGG CGGCTGGAAC TCACCGGCAC AACGGAAGAC
GGCGCGCAGA TCTATGTGGA TTACGCGCAC AAGCCCGACG CGCTTGAGAA TGTGCTCCAG
GCGGTGCGGC CCTTCACGAC CGGCCGCGTC ATCGTCGTTT TCGGCTGCGG CGGCGACCGC
GATCCCGGAA AGCGGCCAAT CATGGGGGAA ATCGCGCGTC GGCTTGCGGA TGTGGTGATC
GTGACCGACG ATAACCCGCG CTCGGAAGTA CCCGCGGAGA TCCGCAGGGC GATCCTGGAG
GCGGTGCCGG AGGCAACCGA AATCGGCGAC CGGCGCGAGG CCATACGGAC CGCTGTCGCG
ATGCTTAACT CAGGCGATAC ATTAATTGTC GCGGGCAAGG GCCATGAAAT CGGCCAGGAA
ATCGCGGGCA CAAAACTCCC GTTTTCCGAT CACGAGGAGG TGCGGCGGGC GCTGAAGGAG
AGGACTGCGT GA
 
Protein sequence
MKLGEFADIL PLSGSIAGET TISGLASDSR RVNAGDLFFA LQGSKADGAA YAADAAGRGA 
VAIIARPGTV GDVGVPVIEA DDPRHVLALA SARLYGAQPA TMVAVTGTSG KTSVAAFTRQ
IWEKAGLAAA SIGTTGVVAP GRDEYGELTT PDPVSLHKLL RELADAGVTH ASMEASSHGL
DQRRLDGVKL AAGGFTNLGR DHMDYHPTVE HYHQSKMRLF KTLLPKGAPA VIFADDPWSE
PTEKVALAAG LQLLTVGRRG TFLTIKRVEH ERHRQRTEIE HEGMIYDIML PLAGDFQVGN
ALVAAGLAIS TGLPADKAVA ALEHLKGASG RLELTGTTED GAQIYVDYAH KPDALENVLQ
AVRPFTTGRV IVVFGCGGDR DPGKRPIMGE IARRLADVVI VTDDNPRSEV PAEIRRAILE
AVPEATEIGD RREAIRTAVA MLNSGDTLIV AGKGHEIGQE IAGTKLPFSD HEEVRRALKE
RTA