| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1997 |
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| Symbol | |
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| ID | 4182084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 2139879 |
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| End bp | 2141990 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638067893 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_674555 |
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| Protein GI | 110634347 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAG CCAGGATCCC CGTCGATGAA CTGACGGAGG AGCAAGCCAA GGACGAACTT
GCCCGTCTTG CGCAGGAGAT CGGGAGGCAT GACCGGCTCT ATTACTCAGA GGACGCGCCG
GAAGTCTCCG ATGCCGAATA TGACGCGTTG CGGCGGCGCA ATCTGGCCAT CGAGCAGGCG
TTCCCGAATC TGATCCGGGC GGATTCGCCG TCGAAGCGAA TCGGAGCACC GGCAGTCGAG
AAATTCGAGA AGGTCCGGCA CAAGGTGCCG ATGCTCTCGC TGGACAACGC TTTCACCGAT
GACGACGTCG TCGACTTCGT GGCGCGTGTC CGCCGCTTTC TGAAGATGGA GCCCCATGCG
CCGATCGCCA TGACGGCGGA GCCGAAGATC GATGGGCTGT CCCTTTCGAT TCGCTATGAA
AACGGGAGGC TCGTCTCGGC TGCAACGCGC GGCGACGGGC AGGTGGGCGA GAATGTCACC
GCCAATGCCC GCGCCGTTGC CGATATTCCT AATGTGCTTT CCGGCGATTT TCCCGAGATC
CTGGAAGTGC GCGGCGAGGT CTACATGACC CATCGCGATT TTCTGGCGCT CAACGAACGC
CAGCGCGCGG AGGGCAAGCA GACCTATGTG AACCCGCGCA ACACGGCGGC AGGATCGCTC
CGCCAGCTGG ACGCGTCGAT CACGGCGGCG CGACCGCTCA AATTCTTCGC CTATGCATGG
GGCGAGGTGA GCGAGATGCC GTCTCAGACC CAAATGGGAA TGGTCGAAGC GCTGAAAAGC
TACGGCTTTC GGACCAACAA GCTGATGTGC CTTTGCGAGA CTGCGCGAGA GCTGCTGGAG
CACTATCATG CCATCGAGGA GCGCCGCGCC ACGCTGGGCT ATGATATCGA CGGCGTCGTT
TACAAGGTGA ACGATCTGGC GCTGCAGCAG CGGTTGGGAT ACGTCTCCCG CAGCCCGCGC
TGGGCCATTG CGCATAAGTT TGCTGCCGAG AAGGCGTTCA CCATTCTGCG CGATATCGAC
ATCCAGGTGG GCCGCACCGG TGCGCTGACG CCTGTGGCGC GGCTGGAGCC AGTCACGGTG
GGCGGCGTGG TGGTGACAAA CGCCACGCTG CACAATGCCG AGGAGATCGA ACGCCTCGGA
ATCAAAATCG GCGATACGGT CCAGGTGCAG CGTGCGGGCG ATGTCATTCC GCAGATTCTC
GGTTATGCGG AGGATCGCAG ACCAGCGGAT GCGAAAGAAT TCGTCTTCCC CAGCGTCTGC
CCCTGCGAGC TCAAGACGCC GGTCGTGCGC GATTCCACGG CGGGAGGCGG GGAGGGCGTG
GTGCGGCGCT GCTCGGGCGA GTTTGCCTGT CCCTTCCAGC GCATCGAACA TCTGCGTCTC
TTCGTCTCCC GGCGCGCTTT CGATATCGAG GGATTGGGCG AAAAGCAGAT CGAGTTCTTC
TTCCGCGACC CGGACCTGCC GGTCAAAAGC CCCGCAGACA TCTTCACACT TGCCGAGCGC
GACGCGCAGA ACATCAAAAA GCTCAAGGAC AAGGAAGGGT GGGGCACGGT CTCGGCCGGA
AATCTCTTCG CGGCCATCGA AGCAAAGCGG ACTATCCCGC TCGACCGCAT GATCTATGGG
CTGGGTATCC GTCACGTGGG TGAGCGCACC GCCGTTACGC TGGCGCGCGG ATATGGTTCA
TGGAAGGCCT TCCACGATTC GGCTCTTGCG ATTGCCGGCG GAGATCTCTC CGCACGGGAA
GAGATGGACG CGCTGGAGGA TATCGGCGAT GCCGTCATAG ACGCGATCGC CACTTATTTC
GCAGAGGAGC ACAATTGCCG GCTTGTGGAG GCGCTCGCCG CGCAGGTCAA CGTGCTGGAG
GCGGAGCGGC CGGTTGCCGA TTCGCCGGTG GCGGGCAAGA CGATCGTCTT TACCGGCGCG
CTCGAACGCA TGTCGCGCGA CGAGGCGAAA GACATGGCCG AGCGGTTGGG AGCCAAGGTG
GCCGGTTCGG TCTCCTCAAA GACGGATCTG GTCGTGGCAG GGCCCGGCGC TGGCTCCAAG
CTCAAAAAGG CAGCCGAGCT CGGCATTGAG GTCATCGACG AGGATATGTG GTTCCAGAGG
ATCGGTGCAT AG
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| Protein sequence | MTTARIPVDE LTEEQAKDEL ARLAQEIGRH DRLYYSEDAP EVSDAEYDAL RRRNLAIEQA
FPNLIRADSP SKRIGAPAVE KFEKVRHKVP MLSLDNAFTD DDVVDFVARV RRFLKMEPHA
PIAMTAEPKI DGLSLSIRYE NGRLVSAATR GDGQVGENVT ANARAVADIP NVLSGDFPEI
LEVRGEVYMT HRDFLALNER QRAEGKQTYV NPRNTAAGSL RQLDASITAA RPLKFFAYAW
GEVSEMPSQT QMGMVEALKS YGFRTNKLMC LCETARELLE HYHAIEERRA TLGYDIDGVV
YKVNDLALQQ RLGYVSRSPR WAIAHKFAAE KAFTILRDID IQVGRTGALT PVARLEPVTV
GGVVVTNATL HNAEEIERLG IKIGDTVQVQ RAGDVIPQIL GYAEDRRPAD AKEFVFPSVC
PCELKTPVVR DSTAGGGEGV VRRCSGEFAC PFQRIEHLRL FVSRRAFDIE GLGEKQIEFF
FRDPDLPVKS PADIFTLAER DAQNIKKLKD KEGWGTVSAG NLFAAIEAKR TIPLDRMIYG
LGIRHVGERT AVTLARGYGS WKAFHDSALA IAGGDLSARE EMDALEDIGD AVIDAIATYF
AEEHNCRLVE ALAAQVNVLE AERPVADSPV AGKTIVFTGA LERMSRDEAK DMAERLGAKV
AGSVSSKTDL VVAGPGAGSK LKKAAELGIE VIDEDMWFQR IGA
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