Gene Meso_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1955 
Symbol 
ID4182522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2096134 
End bp2097138 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content65% 
IMG OID638067851 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_674513 
Protein GI110634305 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00291044 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTGC TGGTCGACTG GGATATTCCG CCGGTGGAGC AGACGGTCAT CGATGCCTGG 
CCCGCCGGTA TCGAAGTGAT CGAGGGCGGC AGCAAACTGA CCGTCGAAGA GAAGCTGAAA
CTGGCGCCGA GCATCGACGT GCAGACCGGT CTGATGCGGG TGATCAACCG GCCCTTCATC
GATGCGGCGA CCCGGCTCAA GCTGGTGCAC ATGACGGGCC ATGGCGTTGA CCTGCTGATG
CGCAACGGCA TCCCCGACCT GATGCAGCAG CGCGGTATCC GGATAGCGAC GGCCCATGCC
GGCGACATAC CGATCGCCGA ATATGCAATC ATGGCCATGG TCATGCTGTC GCGCCAGGTG
CTGCGCTCGC ATGCCGCGCT TACCAGCCGC GGCAAATGGG AGAGCCAGCG GGGCCCGGAG
CTGTTCGGCT CGACGCTCTG CATCGTCGGC TTCGGCAGCA TCGGCAAGGC GACCGCTGTC
CGGGCCAGGG CCTTCGGCAT GCAGGTCGGC ATGGTGACGC TGCACCCCGA ACGTCATGAG
GACCATGACC TGGCCTTCGC CCACACCTAT GCCGATATCG ACAAGGCACT GGCAGTGTCC
GACTATGTGT TGGTCACCGC GCCGCTGACC TCGATCACCA ATGGGCTGAT GGATGCAGGA
CGGTTCGCGG CGATGAAGCC CGGCAGCTAC CTGGTGTGCA TCACCCGGGG TCCGCTGATC
GTCGAGCGGG CGCTTTACGA GGCGCTGCAA TCGGGCCATC TGGCCGGCGC GGCGATGGAC
GGCTGGTGGC GCGAGGAAGA GGACGGGACC GGCCGCGACG GCTATCCGGC CGACCTGCCG
CTGCACCAGT TCAACATGCT GATGACGCCC CACAATTCCG GCACCACCTT CGGCACGCGG
CAGCGCGCGA TCCGCCTGAT CGGCGACAAT ATCGGCCGGT TGATGCGGGG TGAACCCCTG
ATCAACGAAG TGGCCCCCCA CGACCTCAAG AAAATGGCGG TTTGA
 
Protein sequence
MRVLVDWDIP PVEQTVIDAW PAGIEVIEGG SKLTVEEKLK LAPSIDVQTG LMRVINRPFI 
DAATRLKLVH MTGHGVDLLM RNGIPDLMQQ RGIRIATAHA GDIPIAEYAI MAMVMLSRQV
LRSHAALTSR GKWESQRGPE LFGSTLCIVG FGSIGKATAV RARAFGMQVG MVTLHPERHE
DHDLAFAHTY ADIDKALAVS DYVLVTAPLT SITNGLMDAG RFAAMKPGSY LVCITRGPLI
VERALYEALQ SGHLAGAAMD GWWREEEDGT GRDGYPADLP LHQFNMLMTP HNSGTTFGTR
QRAIRLIGDN IGRLMRGEPL INEVAPHDLK KMAV