| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1952 |
|---|
| Symbol | |
|---|
| ID | 4182519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 2093330 |
|---|
| End bp | 2094283 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638067848 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_674510 |
|---|
| Protein GI | 110634302 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0612254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCTGA CCCAACCCAT TCCTGCATCG CCGGCCTCGA CCGGCGCGCG CATCAAGGCC
TATTTCGCCC AGACACGGCT CAGCCTTCTG GTTCGTTCGC CAATCGCGCT GATTTCGGCG
CTAGTGCTGA TTGCCCTGGT GCTGATCGCG CTGATCGGCG CCCCGCTGGC GTTGGAAACG
GCGAACTTCC AGAGCCTGCG CCTGCGCTTC TTCCCCCCGT TCAGCCTCGA GCACGGCTGG
ATTTACGTAT TAGGCGCCGA CGGGCTGGGC CGCAGCATGC TGGCGCAATT GATCGTCGGC
GCGCGCACCA GCTTCATCGT CGCCGGCGCC GCGGTCGGCC TGGCGGCCGT GGTGGGCACC
AGTATCGGCA TGATCAGCGG CTTTGTTGGC GGCTGGGTCG ATGCGGCGCT GATGCGCGTC
AGCGACATCA TCGTTACCGT GCCCTCCCTG CTTCTGGCCC TCGCGGTGCT GTTCGTGCTC
GAACCCAGCA TCTTCAATCT CGTGGCCGTG CTGGCGGTGT CGCGCCTGCC GATCTATTTG
CGGGTGGCCC GCGCCCAGAC CCTCGAACTG CGCGAGCGGG TATTCGTCGA GGCTTCGCGG
GCCATCGGCG CCACCAACCT GCGCATCATC TGGCGCGATA TCCGCCCGCT GGTGCTGCCT
ACGGTAATGA CCGTTTCCAT GCTCGAACTG GCCAGCGTCA TGCTGGCGGC GGCGGGCCTG
AGCTTTCTAG GCGTCGGATT GCAGCGACCC GATGTCGATT GGGGCACCAT CGTTTCGGAG
GGTCGCGAAT ACCTGACCCG GGCCTGGTGG GCCACGGTAT TCCCCGGCAT GGCAATTGTG
ATCACTGCGC TGGCCGCCAA TTTCCTGTCG AACTGGCTGC GCGCCAGCGG CGATCCCCTA
CAGGCCGGCG CGCTCGCCGC CGCTACCGCC CGCCAGGAGG ACGCCCTGAA ATGA
|
|---|
| Protein sequence | MYLTQPIPAS PASTGARIKA YFAQTRLSLL VRSPIALISA LVLIALVLIA LIGAPLALET
ANFQSLRLRF FPPFSLEHGW IYVLGADGLG RSMLAQLIVG ARTSFIVAGA AVGLAAVVGT
SIGMISGFVG GWVDAALMRV SDIIVTVPSL LLALAVLFVL EPSIFNLVAV LAVSRLPIYL
RVARAQTLEL RERVFVEASR AIGATNLRII WRDIRPLVLP TVMTVSMLEL ASVMLAAAGL
SFLGVGLQRP DVDWGTIVSE GREYLTRAWW ATVFPGMAIV ITALAANFLS NWLRASGDPL
QAGALAAATA RQEDALK
|
|---|
| |