| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1950 |
|---|
| Symbol | |
|---|
| ID | 4182517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 2090851 |
|---|
| End bp | 2092371 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638067846 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_674508 |
|---|
| Protein GI | 110634300 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.412794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACC TGTCTAAATC CGGCCTGGCC TGGACCTTGC TGGCTGCGCA GGCCGGACTT
GCCTTCGCGG CAGCACCGGC CCTCACCGCC GAAGGGTCCA TCGTCCTGGC GATGCCGGCC
GAGCCGACCT CGGTCGATGC CTGCGATGAC AGCACTAGGG CCAATGCCCG GGTGCTGCGC
GGCAATGTCG TCGAGGCGCT GACGCGGCTC GACCCACAGT CGGGCGCGGT CGGCCCGCTG
CTCGCCACCG AATGGTCTAG TCCGGATAAC AAGAGCTGGC TCTTCACCAT CCGGCCGGGC
GTCACCTTCC ACGACGGCAC GCCGCTGGAT GCGGCCGCGG TGGCGTTCGG CATCAACCGC
TCGATGAACC CGGACCTGAC GTGCCAGACC CTGTCGCTGT TCCCCACCAA GACCACCGCG
ACCGTCGAAA GCGACATGGT GGTACGGATC ACCACCGAAG AGCCCGACCC GATCCTGCCG
GCACGCATCG CCTATATCGA TCTGCCCTCC CCCAAGACTC CGGAAGCCGC CAAAAGTGAC
ACCCCGATCG GCACCGGTCC CTACCGGTTT GCCGGCCGCG AGATCGGCCA GTCGATAACG
CTATCGGCGT TTGACGGCTA TTGGGGCGAA GCCCCCGAGA TCGCCGAAGC CAACTATGTC
TGGCGGGCCG AGGCCACCAT CCGCGCCAGC ATGATCAAGA CCGGCGAAGC CGATATCGCC
TATGATATCC CCACCCATGA GGCCGAAGGC CAGGCCAATG CCCAGCAATA TTTGACCAAC
GGCGTGTTCT ACCTGCGCCC GATGCTGCAG AAGCCGCCGC TGGACGATCT GCGCGTGCGC
CAGGCCATCG CCTCCTCGAT AGACAAGGCC ACGCTGGCCG AAGTGCTGAT GGACAATTCG
GGCACGCCGA CCGGGCAATT GGTCACACAG CTGATCAATG GCTACGTGCC CGATTATACC
GGCATGCCCT ATGATCTCGA AAAGGCCAAG GCACTGTTCG CGGAAGCCAA GGCGGCCGGC
GTCGCCGTCG ATACGCCGAT CACGCTGGTG GCCCGCACCG ACCTGTTCAG CGGCGCCGAG
GAAGTCTCGC AGGCGATCCA GCAGATGATC CAGCAGGCCG GCTTCACCGT CACGCTGAAA
TCGGTGGATA CCGTCGGCTG GAGCCCCTGG GCTCGCAAGC CGGACTCGCT TACCCAGCCG
GTGAACCTGC TCACCTCGAG CCACAACAAC ATTTCGGGCG ACGGTTCGCT GACCTTCCCG
AACTTCCTGG GCAGCGGCGG CCGGCTGAGC GTGGTCGACA ATGCCGAACT CGATGCCAAG
CTGGCGGCCG CGGCCAAGGC CAGCGGCGAA GACCGGGCCG CGGCATATCG CGAGATCGCG
CAATATGCCT ATGATCAGGA ACTGGTCATT CCGGTTGCGG CCCTGCAGGG GCTGCTGCTG
ACCTCGGATC GCATTGCCTA CGAGGCGGAT GGCTTTACCG ACATCGAACT GCATCTGTCC
GACGTCAAGC ACAAGCAGTA G
|
|---|
| Protein sequence | MINLSKSGLA WTLLAAQAGL AFAAAPALTA EGSIVLAMPA EPTSVDACDD STRANARVLR
GNVVEALTRL DPQSGAVGPL LATEWSSPDN KSWLFTIRPG VTFHDGTPLD AAAVAFGINR
SMNPDLTCQT LSLFPTKTTA TVESDMVVRI TTEEPDPILP ARIAYIDLPS PKTPEAAKSD
TPIGTGPYRF AGREIGQSIT LSAFDGYWGE APEIAEANYV WRAEATIRAS MIKTGEADIA
YDIPTHEAEG QANAQQYLTN GVFYLRPMLQ KPPLDDLRVR QAIASSIDKA TLAEVLMDNS
GTPTGQLVTQ LINGYVPDYT GMPYDLEKAK ALFAEAKAAG VAVDTPITLV ARTDLFSGAE
EVSQAIQQMI QQAGFTVTLK SVDTVGWSPW ARKPDSLTQP VNLLTSSHNN ISGDGSLTFP
NFLGSGGRLS VVDNAELDAK LAAAAKASGE DRAAAYREIA QYAYDQELVI PVAALQGLLL
TSDRIAYEAD GFTDIELHLS DVKHKQ
|
|---|
| |