Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1885 |
Symbol | |
ID | 4182855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 2025874 |
End bp | 2027559 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638067779 |
Product | phage terminase |
Protein accession | YP_674443 |
Protein GI | 110634235 |
COG category | [R] General function prediction only |
COG ID | [COG4626] Phage terminase-like protein, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.421412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAACCCG TTGCAAAATC CGAACCGATG ATCAGGAGGC GCACCCGCCC GTTGCAACCG GTTGCAAATT CCTTCCCTGA TATCCCCGAC CCGTTCGGCT ACGGGCAGCG GGCCGTTGAT TTCCTTCGAT CCCTAAAGCA CCCGAAATCC CGCCTTCCAA ATAAGGCATT CCAGCTTGAC CCCTGGCAGG AAGAAATCGT CCGCGTGATC TACGGCCCGT GCGATGAACA CGGCAATCGT ATCGTTTCCG ATGTTGTGAT CCTGATCGGC AGGGGCAACC GCAAGACCTC GCTCGGCGCG GCTCTTTCCT TGCTTCACAC CCACGGACCG GAGGCCGTGC CGGGCGGCGA AGCCATCTTC GCGGCCGGCG ACAAAAAGCA GGCCCGTATT GCCTATCAGG AAGCCCTTGG CATTCTCCAC GCCGGAGACG CAGACCTATG GAAGAAGGGG CAGGCGAACC GGGCAACCGA CCCGACGAAG ACCATCCGCA TTCAGGATTA CCGGAACACG ATCCAGTTTC CGAACGGCTC TTTTCTCGAA GCCATATCGA ACGATCACGG CACCCAGCAC GGGCGAACGC CGGCCTTTGC CCTTTGCGAT GAATTGCACG CATGGGCGCG GCGCGATCTT TGGGACGTTA TCGACACGGG CTTGACGAAG ACCGCCAACA GCCTTCGCGT CACCATCACC ACGGCAGGCC GGGGCCAGGA TACTATCGGT CATGAAGTGA TCGAACGTGC CCGCAAGATC GCGCGCGGCA AGATCATAGA ACCCAGCACC TTAGCTTTTC TCTTTGAAGT GCCCGCCGAA GCGGATTGGC GCGACGAAAG CCTATGGCCG CTCGCCAATC CGGGCATCCC TCACGGTTAT CCGCCGCTCG ACAAGCTCCG CCAGAAAGCC CGCGTTGCCG AAGACAGCCC CGGCGCGCGT GACGCCTTCA AAATGCTGCA CCTCAATATG TGGCTCGACC GCAGCACGTC GCCCTTTGTC GAAATGTCGA TTTACGACCG GGGCAATAAG CCTATCAACG TTGAAGCCCT TGCCGGCCTG CCGTGCTGGA TAGGCGTGGA CCTTGGCATG ACGGATGACC TTTCCGCCGT TGTCGCTGCC TTCCGCGACC CCGACCTTGA CGAAGGTTAT ATCGTCCTTC CGTTCTTTTT CATGCCCGCC GACAATGTGG AAAAGCGGCA GACGCAATCG GGCTTCCCCT ATGCCGAGCA TGTAGCCGAA GGCCGGATTA CCACCACGAC CGGGAACGTC ACCGATTACC GCGTGATTGA AGACGCCATC CGCGATCTTT GCGAAACCTA TCAGGTGCGG GAAATCGCCT TCGATCCGCA CTATGCCGGG ATGCTCATGA ACAACCTGCT TGAAGACGGC TATCCCGCCG TTTCCTTCCG GCAAGGCTGG GTCACCATGG GTCCGGCCAT CAAAGAGCTT GAACGGGCAA TCCTCGCCGG GCGCTTCCGC CACGGCGGTC ATCCCGTGTT GCGATGGAAC TTCGCCAACA TCGCTATTCA GGACGACGGT AAGGGCAACA AGTCTTTCAA CAAGGCCAAG TCCACCGAAA AGATTGACGG GGCCGTAGCA ACAGCCATGG CCGTTGCCCG TGCCGCTGCC GGCGAAGGCG ATGTACGTTC GATTTTCGAT GACCCGAAGG TCACCGCTCA AGACCTTGTG TGGTGA
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Protein sequence | MQPVAKSEPM IRRRTRPLQP VANSFPDIPD PFGYGQRAVD FLRSLKHPKS RLPNKAFQLD PWQEEIVRVI YGPCDEHGNR IVSDVVILIG RGNRKTSLGA ALSLLHTHGP EAVPGGEAIF AAGDKKQARI AYQEALGILH AGDADLWKKG QANRATDPTK TIRIQDYRNT IQFPNGSFLE AISNDHGTQH GRTPAFALCD ELHAWARRDL WDVIDTGLTK TANSLRVTIT TAGRGQDTIG HEVIERARKI ARGKIIEPST LAFLFEVPAE ADWRDESLWP LANPGIPHGY PPLDKLRQKA RVAEDSPGAR DAFKMLHLNM WLDRSTSPFV EMSIYDRGNK PINVEALAGL PCWIGVDLGM TDDLSAVVAA FRDPDLDEGY IVLPFFFMPA DNVEKRQTQS GFPYAEHVAE GRITTTTGNV TDYRVIEDAI RDLCETYQVR EIAFDPHYAG MLMNNLLEDG YPAVSFRQGW VTMGPAIKEL ERAILAGRFR HGGHPVLRWN FANIAIQDDG KGNKSFNKAK STEKIDGAVA TAMAVARAAA GEGDVRSIFD DPKVTAQDLV W
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