| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1843 |
|---|
| Symbol | |
|---|
| ID | 4182144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1979315 |
|---|
| End bp | 1980577 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638067736 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_674401 |
|---|
| Protein GI | 110634193 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATG GGAAAAAACA GAACGTAGCT GTCGTGGGAG CGGGCATTGT GGGCGTATGC
AGCGCCCTCT GGCTGCAAAG GGAAGGCTAC GACGTCACGC TCATCGATCC CAATCCGCCG
GGCAGCGGCG CTTCCTACGG GAATGCCGGC GCCTTCAGCC CTGCCTCCGT GGTGCCCATG
GCAATGCCCG GCGTGCTGCG CCATGTGCCG GGCTATCTGC TCAATCCCCA TGGTCCCCTC
GCGATCCACT GGGGATATCT GCCGAAGCTG GCGCCCTGGC TCCTGCGCTT CATCCGTTCC
GGCCGGCGCG AGCGGGTGGA CAAGCAGGCA GCGGCACTGG CGGGCCTCCT CGGTCCCGTT
TTCGACTGTC TGATGCCGTT GGCGAAGCAG GCTGAAGCAA CGCATCTCAT CCGGCGCGAC
GGCTTTCTCT ATGTCTATCG AACCGAGGCC GCGCTCCGCG GCGATGCCTA TGGCTGGGAG
CTACGGCGCC GGCACGGGAT CGCCTTCGAT ATCCTCGAAG GCCCTGAAAT CAAGGAGTTC
GATCCGGCGC TCTCGCCCGA CTACCACGCC GCGCTTTTCG TGCCCGGGAA CGGCCATACC
GTCGATCCGC AAGGCCTCGT TCAGCATTTG GCGAGGGCGG TGGAAAAAGC CGGCGGGCGG
CATTTCAAGG CGAGCGCGGA GGATTTCAAG CGTGACGGAT CGGCTGTTAG GGCGGTGTTG
ACCGATAGGG GCGAGGTGGC CTGCGATTTC GCCGTGATCG CCGCCGGCGC CCGGTCCGCG
CGGCTTGCCG CCCGGTTGGG CGAGAAGATC CCGCTCGACA CCGAACGGGG GTATCACCTG
ATGCTCAAGT CGCCGGAGGC GATGCCCAGG GTGCCCGTCC TCGAGGCCAT GCATAAATTC
GTTGCAACGC CGATGCAGGC CGGGCTGCGG ATAGCGGGAA CCGTCGAGTT CGCGGGCCTC
GATAGACCGC CCAACATGGA TCGTGCGCGC CGCCTGCTGC GTCCTGCAAG GGCGCTGTTT
CCCGCCTTGC GCGAGGACTA CCCGGAATCG GAAATGTCCA AGTGGATGGG ATTCCGCCCC
AGCCTGCCGG ATTCTCTTCC GGTGATTGGC CGGTCGAAAG CTTCGCCGGG CATCGTCTAC
GCCTTCGGAC ATGGGCATGT GGGCATGTGC GGCGGACCGA TGACGGGCAA ACTGGTCGCG
GAAATGATCG CCGGCCGCCC GACATCCATC GATATCGCGC CTTTCAGCCA ATCGCGCTTC
TGA
|
|---|
| Protein sequence | MQNGKKQNVA VVGAGIVGVC SALWLQREGY DVTLIDPNPP GSGASYGNAG AFSPASVVPM
AMPGVLRHVP GYLLNPHGPL AIHWGYLPKL APWLLRFIRS GRRERVDKQA AALAGLLGPV
FDCLMPLAKQ AEATHLIRRD GFLYVYRTEA ALRGDAYGWE LRRRHGIAFD ILEGPEIKEF
DPALSPDYHA ALFVPGNGHT VDPQGLVQHL ARAVEKAGGR HFKASAEDFK RDGSAVRAVL
TDRGEVACDF AVIAAGARSA RLAARLGEKI PLDTERGYHL MLKSPEAMPR VPVLEAMHKF
VATPMQAGLR IAGTVEFAGL DRPPNMDRAR RLLRPARALF PALREDYPES EMSKWMGFRP
SLPDSLPVIG RSKASPGIVY AFGHGHVGMC GGPMTGKLVA EMIAGRPTSI DIAPFSQSRF
|
|---|
| |