Gene Meso_1827 details

Gene Information

• Locus tag: Meso_1827
• ID: 4182128
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 1961946
• End bp: 1962629
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 638067720
• Product: exopolysaccharide synthesis, ExoD
• Protein accession: YP_674385
• Protein GI: 110634177
• COG category: [R] General function prediction only
• COG ID: [COG3932] Uncharacterized ABC-type transport system, permease components

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGTTGC AGCAGGTCTT ACGAGAGAAG GTGATGCTGG AAAGCAGGAT GGGGGAAGAA 
GCCGCCGCTA GAAAGGGCCG CAAATCGCCG CGCCGCTTCT CCCGGCTGCT GCAGGCAATG 
GCGGAGGATA CGGCGCGCGA GCGCATATCC GTCAACGATC TGGTCGTCGC GATGGGCGAC 
CGCGCCTTTG GCGCGCTCAT GCTCGTCTTC GCTCTTCCCA ATGTGCTGCC CACGCCGCCG 
GGAACCTCTG GCCTGCTCGG CTTGCCTCTC GTCTATCTTG CCGCCCAGCT CATGCTGGGA 
CAGCGCCCCT GGCTGCCGAA ATTCATTGGA AGCCGTTCGA TCCGGCGCGA GGATTTTGCA 
GCATTCATCG AGCGTGCGGC GCCGTGGCTG CGCCGTGCCG AACGCCTGCT GCGCCCGCGC 
CTGGTATTTC TCGTAAGTCC GGCCGCGGAG CGTCTGGTCG GAGCCGTCTG CCTGGTGCTC 
GCGATCGTCC TTTTTCTGCC GGTTCCGCTT GGCAACATGC TGCCGGCCCT CTCTATCTCC 
GTTTTCTCCT TTGGGATTCT CGGCCGAGAT GGTCTTTGGG TCATCTGCGG CGTCCTTCTC 
GCCGTAATCT CTGCCGTTGT CGCGGGCGGC GTGGTCTTCG CGCTGGTCAA AGGGGCGATC 
TTCGTCCTCA CCAGGCGGTT CTAG 

 

Protein sequence

MPLQQVLREK VMLESRMGEE AAARKGRKSP RRFSRLLQAM AEDTARERIS VNDLVVAMGD 
RAFGALMLVF ALPNVLPTPP GTSGLLGLPL VYLAAQLMLG QRPWLPKFIG SRSIRREDFA 
AFIERAAPWL RRAERLLRPR LVFLVSPAAE RLVGAVCLVL AIVLFLPVPL GNMLPALSIS 
VFSFGILGRD GLWVICGVLL AVISAVVAGG VVFALVKGAI FVLTRRF