| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1819 |
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| Symbol | rpoB |
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| ID | 4181524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 1952432 |
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| End bp | 1956571 |
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| Gene Length | 4140 bp |
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| Protein Length | 1379 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638067711 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_674377 |
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| Protein GI | 110634169 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAGA CCCAGACATT CAACGGTCGC AGGCGCGTAC GCAAGTTTTT CGGGAAGATT
CCGGAAGTTG CGGAGATGCC GAACCTCATC GAGGTTCAGA AAGCATCCTA TGACCAATTC
CTCATGGTCG AGGAGCCCCA GGGCGGGCGC CCCGACGAGG GATTGCAGGC AGTCTTCAAG
TCGGTGTTCC CGATCTCGGA TTTCGCCGGT ACGGCGATGC TCGAATTCGT GAAATACGAG
TTCGAGGCCC CGAAATTCGA CACGGAAGAG TGCCGTCAGC GCGACCTCAC CTATGCGGCG
CCGCTGAAGG TGACGCTGCG CCTGATCGTG TTCGATATCG ATGAGGATAC GGGCTCCAAG
TCCATCAAGG ACATCAAGGA GCAGGACGTC TATATGGGCG ACATGCCGCT CATGACGGAC
AACGGCACCT TCATCATCAA CGGCACCGAG CGCGTGATCG TTTCGCAGAT GCACCGTTCT
CCGGGCGTCT TCTTCGATCA CGACAAGGGC AAGTCCCATT CGAGCGGCAA GCTGCTCTTC
GCCGCCCGCG TGATCCCCTA TCGCGGCTCG TGGCTAGACA TCGAGTTCGA CGCCAAGGAC
ATCGTCTATG CGCGTATCGA CCGCCGGCGC AAGATCCCGG TGACGTCGCT GCTCATGGCG
CTGGGCATGG ATGGCGAGGA AATCCTCTCC ACCTTCTACA ATAAGCTCAC CTTCATCCGT
GACGGCGACA ACTGGCGCGT GCCGTTTTCG GCCGAGCGCT TCCGCGGCAT GAAGGCCACC
GCCGACATCA TTGACGCCGA CACGGGCGAG GTGGTGCTCG AGGCCGGCAA GAAGATGACC
GCGCGCATGG CGCGCCAGCT CGCTGACAAG GGGCTGAAGG CGATCCGCGC CACCGAGGAC
GACCTGCTCG GCAACTATCT CGCCGAGGAT ATCGTCAATA TGAAGACGGG CGAGATCTTC
CTCGAAGCCG GCGACGAGAT CGACGAGAAG ACGCTGAAGA TTCTGCTGGA GACGGCGGGC
AACGAGGTGA AATTCCTCGA CATCGACCAC GTCAATATCG GCGGCTATAT CCGCAACACG
CTGGTTGCCG ACAAGAACGA GAGCCGCCAG GACGCGCTCT TCGATATCTA CCGGGTAATG
CGCCCGGGTG AGCCGCCGAC GCTGGAGACG GCCGAGGCCA TGTTCCACTC GCTGTTCTTC
GATGCCGAGC GCTACGATCT CTCGGCCGTG GGCCGCGTGA AAATGAACAT GCGGCTTGAG
CTCGACTGCC CGGACACCGT GCGCGTGCTG CGCAGCGAGG ATATGGTGGC GGTCGTGAGG
ACCCTGGTCG AGCTGCGCGA CGGCAAGGGC GAGATCGACG ACATCGACAA TCTCGGCAAC
CGCCGCGTGC GCTCGGTGGG CGAGCTGATG GAGAACCAGT ACCGCCTGGG TCTCCTGCGC
ATGGAGCGCG CCATCAAGGA GCGTATGTCG TCGATCGAGA TCGACACGGT CATGCCGCAG
GACCTGATCA ACGCGAAACC GGCGGCCGCC GCCGTACGCG AGTTCTTCGG CTCCTCGCAG
CTCTCGCAGT TCATGGACCA GACGAACCCG CTGTCGGAGA TCACCCACAA GCGCCGCCTC
TCGGCGCTTG GACCGGGCGG CCTGACCCGC GAGCGCGCCG GCTTCGAGGT GCGCGACGTG
CACCCGACGC ATTACGGCCG CATCTGCCCG ATCGAAACGC CGGAAGGTCC GAATATCGGC
CTGATCAATT CGCTTGCCAC CTTTGCCCGC GTCAACAAAT ACGGCTTCAT CGAGACGCCG
TACCGTAAGA TCGTGGACGG CAAGGTGACG GAAGAGGTGG TTTATCTCTC GGCGATGGAG
GAGGCCAAGC ACTATGTGGC CCAGGCCAAC GCCACGATTG ACGAGAATGG CGGCTTTGCC
GACGAGTTCG TGGTCTGCCG TCACGCCGGC GAAGTGATCA TGGCGCCGCG CGAGAACGTC
GACCTGATGG ACGTCTCGCC GAAGCAGCTC GTCTCGGTCG CCGCGGCGCT CATCCCGTTC
CTCGAGAATG ACGACGCCAA CCGCGCTCTC ATGGGCTCCA ACATGCAGCG TCAGGCCGTG
CCTCTGGTGC GGGCCGAGGC GCCCTTCGTG GGCACTGGCA TGGAGCCGGT GGTGGCCCGT
GATTCCGGCG CGGCCATCGC GGCCCGCAGG ACCGGCGTCG TCGACCAGGT GGACGCAACC
CGTATCGTTA TCCGTGCCAC GGAAGACGTG GATGCCTCCC AGTCGGGCGT TGATATCTAC
CGGCTGCAGA AGTTCCAGCG CTCCAACCAG AACACCTGCA TCAACCAGCG TCCGCTGGTT
CGCGTGGGCG ATCTGATCAA CAAGGGCGAC ATCATCGCCG ACGGTCCGTC AACGGACCTG
GGCGATCTGG CGCTCGGCCG GAACGTGCTC GTGGCCTTCA TGCCGTGGAA CGGCTACAAC
TACGAGGACT CCATCCTGCT CTCCGAGCGC ATCGTGCGCG ACGACATCTT CACCTCGATT
CACATCGAGG AGTTCGAGGT CATGGCGCGC GACACGAAGC TCGGGCCTGA GGAGATCACG
CGCGACATTC CGAACGTGTC GGAAGAAGCG CTGAAGAATC TCGATGAGGC GGGCATCGTC
TATATCGGCG CGGAAGTGCA GCCGGGCGAC ATCCTGGTGG GCAAGATCAC GCCGAAGGGC
GAAAGCCCGA TGACGCCGGA GGAGAAGCTG CTGCGCGCCA TCTTCGGCGA GAAGGCGTCC
GACGTCCGCG ATACGTCCAT GCGCATGCCG CCCGGCACCT ACGGGACGGT GGTGGAGGTG
CGTGTCTTCA ACCGCCACGG GGTGGAGAAG GACGAGCGCG CCATGGCGAT CGAGCGCGAG
GAGATCGAGC GGCTCGCCAA GGACCGCGAC GACGAGCAGT CGATTCTCGA CCGCAACGTC
TATGCGCGCC TTTCTGAAAT GCTGATCGGC AAGGAAGCGA TCGCCGGGCC CAAGGGCTTC
AAGAAGGGCG GTGCGCTGAC GAAGGAACTT CTCGGCGAGT ATCCCCGTTC GCAATGGTGG
CAGTTCGCCG TTGAGGACGA GAAGCTGCAA AGCGAGCTCG AGGCGCTTCG CGCCCAGTAC
GACGAATCCA AGAACGCGCT GCAGCAGCGC TTCATGGACA AGGTCGAGAA GGTGCAGCGC
GGCGACGAGA TGCCTCCCGG TGTCATGAAG ATGGTCAAGG TCTTCGTGGC CGTAAAGCGC
AAGATGCAGC CCGGAGACAA GATGGCCGGC CGCCACGGCA ACAAGGGTGT TGTGTCCAGG
ATCGTGCCGA TCGAGGACAT GCCGTTCCTG GAGGACGGCA CGCATGTGGA TATCGTGCTC
AATCCGCTCG GCGTGCCCTC GCGCATGAAT GTGGGGCAGA TCCTCGAAAC GCATCTGGGC
TGGGCGTGCG CGGGCATGGG CCGGCAGATC GGCGAGCTGA TCGATGCCTA TAAGGAGGCA
GGCGACATCA AGCCGCTCCG GGCCAAGATC GAATCGCTGA TCCCGGACAA TGACCGCAAC
GAGCCCGTCC GCCAGTACGA TGACGAAAGT GTCGTGCGGC TGAGTGAGCA GTTGCGCCGC
GGCGTCTCCA TCGCAACGCC CGTTTTCGAC GGCGCGCATG AATCCGACAT CAACGAGATG
CTGGAGGAAG CGGGCCTCAA CTCAAGCGGG CAGGTGACGC TCTATGACGG GCGCACCGGC
GAGGAGTTCG ACCGCAAAGT GACTGTGGGC TACATTTATA TGCTCAAGCT TCACCACCTG
GTGGATGACA AGATCCACGC GCGTTCCATC GGCCCGTACT CGCTCGTCAC CCAGCAGCCG
CTGGGCGGCA AGGCGCAGTT CGGCGGCCAG CGCTTCGGCG AGATGGAGGT GTGGGCGCTC
GAAGCTTACG GCGCTGCCTA CACGCTGCAG GAGATGCTCA CGGTCAAGTC CGACGACGTG
GCCGGCCGAA CCAAGGTCTA CGAGGCCATT GTACGCGGCG ACGATACGTT CGAAGCGGGC
ATTCCCGAAA GCTTCAACGT TCTCGTCAAG GAGATGCGCT CGCTGGGGCT CAATGTGGAG
CTGGAGAATT CCTCGCGCTT CGACACGCCG CCGGCGCAGC TGCCGGAAGC CGCCGAATAG
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| Protein sequence | MAQTQTFNGR RRVRKFFGKI PEVAEMPNLI EVQKASYDQF LMVEEPQGGR PDEGLQAVFK
SVFPISDFAG TAMLEFVKYE FEAPKFDTEE CRQRDLTYAA PLKVTLRLIV FDIDEDTGSK
SIKDIKEQDV YMGDMPLMTD NGTFIINGTE RVIVSQMHRS PGVFFDHDKG KSHSSGKLLF
AARVIPYRGS WLDIEFDAKD IVYARIDRRR KIPVTSLLMA LGMDGEEILS TFYNKLTFIR
DGDNWRVPFS AERFRGMKAT ADIIDADTGE VVLEAGKKMT ARMARQLADK GLKAIRATED
DLLGNYLAED IVNMKTGEIF LEAGDEIDEK TLKILLETAG NEVKFLDIDH VNIGGYIRNT
LVADKNESRQ DALFDIYRVM RPGEPPTLET AEAMFHSLFF DAERYDLSAV GRVKMNMRLE
LDCPDTVRVL RSEDMVAVVR TLVELRDGKG EIDDIDNLGN RRVRSVGELM ENQYRLGLLR
MERAIKERMS SIEIDTVMPQ DLINAKPAAA AVREFFGSSQ LSQFMDQTNP LSEITHKRRL
SALGPGGLTR ERAGFEVRDV HPTHYGRICP IETPEGPNIG LINSLATFAR VNKYGFIETP
YRKIVDGKVT EEVVYLSAME EAKHYVAQAN ATIDENGGFA DEFVVCRHAG EVIMAPRENV
DLMDVSPKQL VSVAAALIPF LENDDANRAL MGSNMQRQAV PLVRAEAPFV GTGMEPVVAR
DSGAAIAARR TGVVDQVDAT RIVIRATEDV DASQSGVDIY RLQKFQRSNQ NTCINQRPLV
RVGDLINKGD IIADGPSTDL GDLALGRNVL VAFMPWNGYN YEDSILLSER IVRDDIFTSI
HIEEFEVMAR DTKLGPEEIT RDIPNVSEEA LKNLDEAGIV YIGAEVQPGD ILVGKITPKG
ESPMTPEEKL LRAIFGEKAS DVRDTSMRMP PGTYGTVVEV RVFNRHGVEK DERAMAIERE
EIERLAKDRD DEQSILDRNV YARLSEMLIG KEAIAGPKGF KKGGALTKEL LGEYPRSQWW
QFAVEDEKLQ SELEALRAQY DESKNALQQR FMDKVEKVQR GDEMPPGVMK MVKVFVAVKR
KMQPGDKMAG RHGNKGVVSR IVPIEDMPFL EDGTHVDIVL NPLGVPSRMN VGQILETHLG
WACAGMGRQI GELIDAYKEA GDIKPLRAKI ESLIPDNDRN EPVRQYDDES VVRLSEQLRR
GVSIATPVFD GAHESDINEM LEEAGLNSSG QVTLYDGRTG EEFDRKVTVG YIYMLKLHHL
VDDKIHARSI GPYSLVTQQP LGGKAQFGGQ RFGEMEVWAL EAYGAAYTLQ EMLTVKSDDV
AGRTKVYEAI VRGDDTFEAG IPESFNVLVK EMRSLGLNVE LENSSRFDTP PAQLPEAAE
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