Gene Meso_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1808 
Symbol 
ID4181514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1937584 
End bp1938318 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content63% 
IMG OID638067701 
Productcondensin subunit ScpB 
Protein accessionYP_674367 
Protein GI110634159 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0500833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAT CTTCCAATGT CATTCCGTTC GCCGAGGAGG ACGAGCAGGC GCCTTCGCCT 
GAAGGCGTCG GACCTTCGAG CGTGGCCTTT GCCGAGGCGA AGCGAATGGC CGAGGCCCTG
GTCTTCGCCA GCGCGGCTCC GGTTTCATTC AAAAGCCTTT CGGATCGGCT GCCCGACGGG
GTGGACATTC GCGCCATCAT GGAAGAGCTG AAGGGGGATT ACGAAAGACG CGGCGTCAAT
CTCGTCCGGG TGGAGGATTC GTGGGCATTC CGGACGGCGG GCGATCTTGC GTTCCTGATG
AGCCGCGACG CGGTGCAGCA GAAGAAGCTT TCGCGCGCCG CGCTGGAGAT GCTTTCCGTG
ATCGCCTACC ATCAGCCGGT AACACGCGCG GAGATCGAGG AGATCCGCGG CGTGGAGACC
TCCAAGGGCA CGCTCGACCT CTTGCTCGAG ACCGGCTGGG TTAGGATGCG AGGCCGCCGG
CGCGCGCCGG GGAGGCCGGT AACCTATGGA ACGACTCTCG AATTCCTCGA TCATTTCGGG
CTCGAGGAGT TGCGCGACCT ACCCGGTATC GAAGAACTCA AGGGAGCAGG CCTCCTCTCC
TCGCGCATGC CGGCCAATTT CTCCGTGCCC CAGCCGCCCT CGGACCCGGA CATGCTGAGC
GAGGACGAGG ACCCGCTGAC GGATATCGAT CTTGAAGAAC TCGGCCTGTT GACACCGCGC
GTCGAGGGTG ATTGA
 
Protein sequence
MTESSNVIPF AEEDEQAPSP EGVGPSSVAF AEAKRMAEAL VFASAAPVSF KSLSDRLPDG 
VDIRAIMEEL KGDYERRGVN LVRVEDSWAF RTAGDLAFLM SRDAVQQKKL SRAALEMLSV
IAYHQPVTRA EIEEIRGVET SKGTLDLLLE TGWVRMRGRR RAPGRPVTYG TTLEFLDHFG
LEELRDLPGI EELKGAGLLS SRMPANFSVP QPPSDPDMLS EDEDPLTDID LEELGLLTPR
VEGD