Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1708 |
Symbol | |
ID | 4181338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1829401 |
End bp | 1831857 |
Gene Length | 2457 bp |
Protein Length | 818 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638067600 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_674268 |
Protein GI | 110634060 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTACGTC TCTTAGGATA TTTTTTCGGC ATCGGCATTG TCTTTGCGCT GATTGCTGCT GCAGGTGTGG CACTCTATGT CGGAGATCTG TCGAAAGACC TGCCTGATTA CGAAGTGCTG GCAAAGTATG AACCGCCGGT GATGACCCGC GTTCATGCGT CCGACGGTTC GCTGATGGCG GAATTCGCCC GCGAGCGGCG CCTTTACCTT CCGATCAAGG CCATTCCGGA CCGTGTAAAG GCCGCATTTC TTTCGGCTGA GGACAAGAGC TTCTATTCCC ACCCTGGCGT TGATCCGGCG GGTCTGGTCA GCGCTGTGTT CACCAATCTG CAGAATATCG GTACCGGGCG CAGGCCGGTC GGTGCATCCA CGATCACGCA GCAGGTGGCA AAGAATTTCC TGCTGAGCTC TGACCAGACG ATCGAGCGGA AGATTAAGGA GATGATTCTC GCCTTCCGTA TCGAGCAAGC CTACTCCAAG GATCGCATCC TGGAGCTTTA TTTGAATGAG ATCTTCTTCG GTCTTGGCGC ATACGGAATC GCCGGCGCGG CATTGGCCTA TTACGACAAG CCTGTTTCAG AACTCAGCAT AGCGGAAGCC GCATACCTCG CCTCGCTGCC CAAAGGGCCT TCGAACTACC ATCCTTTCCG TCATACCGAT CGCGCCCTCG AGCGCCGCAA TTGGGTAATC GATCGGATGC ACGCGAACGG CTACATCACC GCCAAGGAAG CCGCGGAGGC GAAGGCCACC GGCCTCGACG TGAAGCCGCG CGAACGTGGC AATTATCTCG CCGGCTCTGA ATATTTCACC GAGGAAGTCC GGCGTGAGCT TATCGCGCGC TATGGAGAGG ACGCCCTTTA TGATGGCGGC CTCTATGTAC GCACTACGCT CGATCCAAAG CTGCAGCTTC TCGCTGAGAA AGCCTTGCGC CACGGCCTGA TGAAGTACGA TACCCTGCGG GGCTACCGCG GGCCGGTGAA GCATATCGAT ATCTCCGGCG ATTGGGGCGA ACCGCTGGCC GAAGTGCCCG GTCTGCGTGA CGTATCCGAG TGGGCTTTGG CCGTTGTCCT TGAAGCTTCC GGCAACGATG TGAAGATCGG GATACAGCCC AAGCGCGAGA TCTCCGGCGA GCTGTCGAAG GAGCGGGAAA CCGGAACAAT CGACACTGGC GATATCGGCT GGGTGCTCCG TCACGTGGTC GATGGGAAGC TCCTCAAGGC AAAGTCGCTG GAAGACGTGT TCGAGCCGGG CGATGTGATC TATGTCGAGC GCAAAAGCGA GGGACAGGAT ACGTGGCTGG TTCGGCAGGT GCCGGCAATC GGCGGCGCGC TGGTTGCCAT GGATCCGCAC ACCGGCCGCG TGCTTGCAAT GGCGGGAGGC TTCTCTTACG CGGCCTCCGA GTTCAACCGC GCCACGCAGG CCTACCGCCA GCCCGGCTCC TCCTTCAAGC CCATCATATA TGCCGCGGCA CTCGACAACG GATACACGCC CGCGACGGTG ATCATGGACG CGCCGCTCAC CATCCATGTC GGAAACCAGG TCTGGGAGCC GAAGAACTAT GGCGGCGATT TCGCCGGCCC CTCCACGCTG CGCACAGGCA TCGAGCGCTC GCGTAACCTG ATGACGGTTC GGCTAGCGCA GGATATGGGA ATGGATCTTG TCGCCGAATA TGCGGAGCGT TTCGGCATCT ATGACGACAT GCCGGAGCAC ATCGCCATGT CGCTGGGCTC GGGCGAGACG ACGGTGATGC GCATGGTCTC GGCCTATGCG GTCATGGCCA ATGGCGGCAA GTTCATCCAG CCCTCGCTCG TCGATCGCAT CCAAGACCGC TACGGCAGGA CCGTCTACAA ACACGACACG CGCGAGTGCG AGGGCTGTGC CGCCGATGCT TGGAAAAATC AGCCCGAAGC CGAGCTGATC GACAATCGCG AGCAGGTGCT TGACCCGATG ACCGCGTACC AGATCACCTC CATCATGCAG GGCGTGGTGC AGCGCGGCAC GGCAAGCAGC CTGGCGGAGC TCGGCCGCCC CATTGCGGGC AAAACCGGTA CGACGAACGA CGAGAAGGAT GCCTGGTTCA TTGGCTATAC GCCGGACATG GTCGTAGGCG TTTTCATGGG ATACGATCAG CCGAAGCCCA TGGGCAAGGG TTCCACCGGC AGCGGCCTGG CGGCACCGGT CTTCAAGGAA TTCATGGCGG ATGCCCTGAA GGACATGCGT CCCGTGGACT TCCAGGTTCC CGAAGGCATG CAGCTCATCG CCATCGACCG GAAGACCGGC ATGCGGGCTC AGGAAGGTGC GCCCGGCACC ATCCTGGAAG CCTTCAAGCC CGGCACCGGC CCGGCGGACA GCTATTGGGT CATCGGCATG GAGAGCTCCC AGGTGAGCAC CGGCGCGAGC AATATCTCGC CCGAGGCAAA CCGGGCGATC ACCTCCGGGG CAGGCGGCCT CTTTTAG
|
Protein sequence | MLRLLGYFFG IGIVFALIAA AGVALYVGDL SKDLPDYEVL AKYEPPVMTR VHASDGSLMA EFARERRLYL PIKAIPDRVK AAFLSAEDKS FYSHPGVDPA GLVSAVFTNL QNIGTGRRPV GASTITQQVA KNFLLSSDQT IERKIKEMIL AFRIEQAYSK DRILELYLNE IFFGLGAYGI AGAALAYYDK PVSELSIAEA AYLASLPKGP SNYHPFRHTD RALERRNWVI DRMHANGYIT AKEAAEAKAT GLDVKPRERG NYLAGSEYFT EEVRRELIAR YGEDALYDGG LYVRTTLDPK LQLLAEKALR HGLMKYDTLR GYRGPVKHID ISGDWGEPLA EVPGLRDVSE WALAVVLEAS GNDVKIGIQP KREISGELSK ERETGTIDTG DIGWVLRHVV DGKLLKAKSL EDVFEPGDVI YVERKSEGQD TWLVRQVPAI GGALVAMDPH TGRVLAMAGG FSYAASEFNR ATQAYRQPGS SFKPIIYAAA LDNGYTPATV IMDAPLTIHV GNQVWEPKNY GGDFAGPSTL RTGIERSRNL MTVRLAQDMG MDLVAEYAER FGIYDDMPEH IAMSLGSGET TVMRMVSAYA VMANGGKFIQ PSLVDRIQDR YGRTVYKHDT RECEGCAADA WKNQPEAELI DNREQVLDPM TAYQITSIMQ GVVQRGTASS LAELGRPIAG KTGTTNDEKD AWFIGYTPDM VVGVFMGYDQ PKPMGKGSTG SGLAAPVFKE FMADALKDMR PVDFQVPEGM QLIAIDRKTG MRAQEGAPGT ILEAFKPGTG PADSYWVIGM ESSQVSTGAS NISPEANRAI TSGAGGLF
|
| |