| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1648 |
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| Symbol | |
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| ID | 4179247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 1777145 |
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| End bp | 1778128 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638067540 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_674208 |
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| Protein GI | 110634000 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.141846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGGCG TAGAACAAAT CGAAGTGGAT AGCGGCGAGG CCGGGATGCG GCTCGACCGC
TGGTTCAAGA CCCACTACCC GGGCCTTGGC TTCGGGCAGC TTCAAAAATT GCTTCGCACC
GGCCAGGTGC GCGTTGATGG CGGCCGCGCC AAAGCCGATA CGCGGGTTCA GGCCGGGCAG
ATGATTCGTG TGCCGCCGCT CGCCGTCGAC CACAAGGGCG CGCCCGCCAC CATCCGCACC
ATGCGCGACC GCGGCGACGC GGAGGTGCTC TCTCAGATGC TGATCCATGA AGACGAGAAG
GTATTCGTCT TCAACAAGCC TGCGGGCCTT GCCGTGCAAG GCGGCTCCGG CGTCAACCGC
CATGTGGACG GCATGCTGGA GGCCTGGCGC AACAAACGCG GTGAGAAGCC GCGGCTGGTG
CACCGCCTCG ACCGCGATAC TTCAGGCGTG CTCGTGGTCG CGCGTACGCG GCTTGCGGCC
GTAAAGCTCA CCGAATCATT CCGGGCGCGC GAGACGAAGA AGATCTATTG GGCGCTTATC
AAAGGCGTGC CGAAGAAGGC GGAAGGTCGC ATCTCCACTT GGCTCGTGCG AGAGACCACG
CCCGATGGCG ACCGAATGCG CATCGCGAAG CATGGAGAGC CGGGAGCAGA TCATGCCGTC
TCGACCTACC GGCTTGTGGA ACAGGCTGGA ACGGCGCTCT CCTGGCTTGT GATGGAGCCC
TTTACCGGTC GCATGCACCA GCTTCGCGTA CATGCCGCAC ATATCGGCTG TCCCATCATC
GGTGATCCCA AATATTTCGA GGCCGACCAG AATTGGGAAC TGCCGGGAGG CATTCAAAAC
CGGCTCCATC TCCATGCCCG GCGCATCATC ATCCCGCATC CCGACGGCGG CAGCATCGAT
GTGACCGCCG AGATGCCGCC GCATATGCAG CAGAGCTGGA ACCTGCTTGG TTTCAATGAA
GCGGCGGCGG AAGAGGAAAT CTAA
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| Protein sequence | MAGVEQIEVD SGEAGMRLDR WFKTHYPGLG FGQLQKLLRT GQVRVDGGRA KADTRVQAGQ
MIRVPPLAVD HKGAPATIRT MRDRGDAEVL SQMLIHEDEK VFVFNKPAGL AVQGGSGVNR
HVDGMLEAWR NKRGEKPRLV HRLDRDTSGV LVVARTRLAA VKLTESFRAR ETKKIYWALI
KGVPKKAEGR ISTWLVRETT PDGDRMRIAK HGEPGADHAV STYRLVEQAG TALSWLVMEP
FTGRMHQLRV HAAHIGCPII GDPKYFEADQ NWELPGGIQN RLHLHARRII IPHPDGGSID
VTAEMPPHMQ QSWNLLGFNE AAAEEEI
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