| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1638 |
|---|
| Symbol | trpD |
|---|
| ID | 4179237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 1765530 |
|---|
| End bp | 1766546 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638067530 |
|---|
| Product | anthranilate phosphoribosyltransferase |
|---|
| Protein accession | YP_674198 |
|---|
| Protein GI | 110633990 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATC TCAAGGCACA TATCGCCAAA GTGGCTTCCG GAGCTGCGCT GAGCTTTGCC
GAAGCGCGTG AAGCTTTCGG GATCATCATG TCCGGCGAGG CCACACCAAG CCAGATCGGC
GGATTTCTGA TGGCGCTGCG CGTGCGCGGC GAGACGGTGG ATGAAATCAG CGGCGCGGTC
GATACGATGC GCTCCAAGAT GCTGCCGGTC ACCGCTCCGG CCGAAGCGGT CGATATCGTG
GGCACCGGGG GCGACGCTTC GGGAACCTAC AATGTCTCGA CCTGCGCAGC CTTCATAGTC
GCCGGCTGCG GCGTTCCGGT TGCCAAGCAT GGCAACCGCG CACTCTCCTC GAAATCGGGA
GCAGCCGACA GCCTCGTCGC GCTCGGCGTC AATATCGAGC TCGGGCCTGA CCAGATAGCC
GCCTGCATCG CCGAGGCCGG TGTCGGCTTC ATGTTCGCAC CCAGCCACCA CGCGGCGATG
CGCCATGTGG GGCCGACGCG TGTGGAGCTC GGCACCAGAA CGATCTTCAA TCTCTTAGGG
CCTCTATCGA ATCCGGCGGG CGTTAAAAGG CAGCTCGTCG GAGTCTTCTC GGCCCAATGG
GTGGAGCCTC TGGCGCATGT CCTGCGGCAG TTGGGAACGG AAAAGGCCTG GGTCGTGCAC
GGAGACGGGC TTGACGAAAT GACGACCGCC GGCGTCACCC GGGTGGCCTC CCTGGAGTAT
GGCGAGGTGA GGACCTTCGA AATCACCCCC GAAGAGGTTG GATTGCAGCG GTCTGCGGCC
GCGGCCCTCA AGGGCGGCGA CGGCGAGTAT AACGGCAAGG CTCTGCGCCG GGTGCTTGAG
GGCGAACGGA ACGCCTATCG CGACATCGCC GTTCTGAATG CCGGCGGCGC GCTGATCGTC
GCGGGCAAGG CAGAGACCCT GAAAGACGCT GTCGCCCTCG CCTCGGAGTC GATCGAAAGT
GGCCGGGCGC TGGCCGCGCT CGAGAAGCTC GTCGAGGTTT CCAACCGGAA ACCCTGA
|
|---|
| Protein sequence | MADLKAHIAK VASGAALSFA EAREAFGIIM SGEATPSQIG GFLMALRVRG ETVDEISGAV
DTMRSKMLPV TAPAEAVDIV GTGGDASGTY NVSTCAAFIV AGCGVPVAKH GNRALSSKSG
AADSLVALGV NIELGPDQIA ACIAEAGVGF MFAPSHHAAM RHVGPTRVEL GTRTIFNLLG
PLSNPAGVKR QLVGVFSAQW VEPLAHVLRQ LGTEKAWVVH GDGLDEMTTA GVTRVASLEY
GEVRTFEITP EEVGLQRSAA AALKGGDGEY NGKALRRVLE GERNAYRDIA VLNAGGALIV
AGKAETLKDA VALASESIES GRALAALEKL VEVSNRKP
|
|---|
| |