| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1624 |
|---|
| Symbol | |
|---|
| ID | 4179830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1749490 |
|---|
| End bp | 1750458 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638067516 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_674184 |
|---|
| Protein GI | 110633976 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.686327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACCG TCCTCGACAC CGTCTCCAAG CCGCGCCCGC GCCATCCCGA GAAGGCGCAT
CGGCCCGATC AGGAAGTTCT GCGCAAGCCG GACTGGATCC GTGTCAAAGC GCCTACCTCC
AGGGGCTATT TGGAAACGCG CGAGATCGTG AAGACCAACA AGCTTGTCAC GGTCTGCGAG
GAGGCGGGCT GTCCCAATAT CGGCGAATGC TGGGACAAGA AGCACGCGAC CTTCATGATC
ATGGGTGAGA TCTGCACCCG TGCCTGCGCC TTCTGTAATG TCGCGACGGG CATTCCCGGC
CCGCTCGATC CGAACGAGCC CGCCAACGTG GCGAAAGCTG TCCGCGAGAT GGGGCTGAAC
CACGTCGTCA TCACCTCCGT CGACCGGGAC GATCTGAATG ACGGGGGCGC GCAGCATTTT
GCCGACGTGA TCCAAGCGAT CCGTGCGGCG ACGCCGCAGA CCACCATCGA GATCCTGACG
CCGGACTTCC TGCGCAAGGA CGGCGCTTTG GAGTTGGTCG TGGCCGCCAA ACCAGATGTC
TTCAACCACA ATCTGGAGAC AGTCCCCTCG AAATACCTGA CGGTGCGCCC TGGCGCCCGC
TACTTCCATT CCATCCGGCT CTTACAGAGG GTGAAGGAGA TCGATCCTTC GATCTTTACG
AAATCCGGAA TTATGGTCGG GCTTGGCGAG GAGCGAAACG AGGTGCTTCA GCTGATGGAT
GACCTGCGCT CGGCGGATGT CGATTTCATC ACAATCGGGC AGTATCTCCA GCCCACTAAA
AAGCACCACC CAGTGAAGAA GTTCGTGACG CCGGAAGAGT TCAAATCCTA CGAGACCATC
GCCTACACCA AGGGCTTTCT AATGGCTTCC TCCAGCCCGC TCACGCGATC TTCGCACCAT
GCGGGCGAGG ATTTCGAGCG CTTGCGCGCC GCGCGCGAGG CACGGCTCTC CCTGGCGAAG
ACGGCTTAA
|
|---|
| Protein sequence | MVTVLDTVSK PRPRHPEKAH RPDQEVLRKP DWIRVKAPTS RGYLETREIV KTNKLVTVCE
EAGCPNIGEC WDKKHATFMI MGEICTRACA FCNVATGIPG PLDPNEPANV AKAVREMGLN
HVVITSVDRD DLNDGGAQHF ADVIQAIRAA TPQTTIEILT PDFLRKDGAL ELVVAAKPDV
FNHNLETVPS KYLTVRPGAR YFHSIRLLQR VKEIDPSIFT KSGIMVGLGE ERNEVLQLMD
DLRSADVDFI TIGQYLQPTK KHHPVKKFVT PEEFKSYETI AYTKGFLMAS SSPLTRSSHH
AGEDFERLRA AREARLSLAK TA
|
|---|
| |