| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1621 |
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| Symbol | ispDF |
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| ID | 4179827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 1747305 |
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| End bp | 1748531 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638067513 |
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| Product | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein |
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| Protein accession | YP_674181 |
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| Protein GI | 110633973 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.333836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAC CTTTTGAAAA GGATAGGCGC AACCGTCGAG TTGCCGTTGT GGTGGTTGCT
GCAGGGCGCG GCGAGCGGGC CGGCCAGGCC CAGAACGGCC CGAAACAATA CCGGCTGATT
GGCGGCAAGC CTGTCATCCG CCACACACTT GAAGTCTTGG CGAAGAGCAA ACGCGTCGGC
ACAATCGCCG TTGCCGTCCA TCCAGAGGAT AGCTCCCTCT TCAACCAGGC ACGCGAAGGA
CTGGATGGCG ATATCCGCGC CGTTCATGGC GGAGCCTCAC GGCAGGAATC GACGCGGCTT
GCGCTTGCCG CGCTCGAAGA GGTGAAGCCT GATATCGTGC TTATCCATGA CGGCGTAAGG
CCATTCATCG ATGAAGCATT GATTGAGCGC GTCATAGAGG CCGTGGGTGA GGACAGCGGT
GCCCTTCCCG CACTTCCGGT GTCCGACACG CTGAAACGTT CGGGTGTGAA CGGCATCATA
ACGGGCACCG TGCCGCGCGA CGGTCTGTTT GCCGCTCAGA CTCCTCAAGG CTTCCCTTTT
CGCCCGATCT ATGAGGCACA CCAGAAAGCT TGGCAGTCCG GCCGTTCGGA TTTCACGGAC
GATGCAGCTA TCGCTGAATG GGCAGGCATT TCGGTCCGCC TTGTCAGCGG CTCGCCGGAC
AATGTGAAGC TCACATGGGC CAAGGATATT GCTCTGGCCG ACCAAAGGTT AGGACCCGCC
ATGACGGAGT TGCCGGATAT CCGGGTAGGC AATGGATATG ATGTGCATGG GTTCGGTCCG
GGTGGCCATG TAACTCTGTG CGGTGTTCAA ATCCCTCACG GCAAAACCCT GATGGGTCAT
TCCGATGCGG ATGTGGGTCT GCACGCCCTT ACAGATGCGC TGCTCGCCAC CTGTGGGGCC
GGCGATATAG GCACCCACTT TCCGCCCTCG GACCCGCAAT GGAAAGGCGC AAAATCCCGC
ATTTTTGTCG AACACGCGGT CAATCTCCTA CGTGCGCGCG GCGGGCGCAT CGCCAATGCT
GATGTCACGC TCATTTGCGA GGCGCCGCGC ATCGGGCCTT ATCGCGAGGC CATGCTGGCG
GAACTTTCGG ATATGTTGCA GATTTCGCCG GAGCGCGTTT CCGTCAAGGC GACTACCAAT
GAGGGGCTCG GTTTCATTGG CCGGGCCGAG GGGATCGCGG CGATCGCCAC GGCTACGGTC
GCCTACCCTG GCTCCCTGGG AAACTGA
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| Protein sequence | MNAPFEKDRR NRRVAVVVVA AGRGERAGQA QNGPKQYRLI GGKPVIRHTL EVLAKSKRVG
TIAVAVHPED SSLFNQAREG LDGDIRAVHG GASRQESTRL ALAALEEVKP DIVLIHDGVR
PFIDEALIER VIEAVGEDSG ALPALPVSDT LKRSGVNGII TGTVPRDGLF AAQTPQGFPF
RPIYEAHQKA WQSGRSDFTD DAAIAEWAGI SVRLVSGSPD NVKLTWAKDI ALADQRLGPA
MTELPDIRVG NGYDVHGFGP GGHVTLCGVQ IPHGKTLMGH SDADVGLHAL TDALLATCGA
GDIGTHFPPS DPQWKGAKSR IFVEHAVNLL RARGGRIANA DVTLICEAPR IGPYREAMLA
ELSDMLQISP ERVSVKATTN EGLGFIGRAE GIAAIATATV AYPGSLGN
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