Gene Meso_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1588 
Symbol 
ID4180281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1710243 
End bp1711502 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content60% 
IMG OID638067480 
Productputative glucose/sorbosone dehydrogenase 
Protein accessionYP_674148 
Protein GI110633940 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGCA GGAAACTTGT GTCAGGACTT CTGCTCAACA GCATGTTGGC CGCACCGCTC 
GCGGCGCAGG AAAACTTGGA CAAGCTGTCG AGCATGCAGC GTACGGATGC CAGCTTCACC
TTCGTCGATC AGGAAGGCGA CCGGGCAGAC GCGTTGAAGG AAATCATTCA GTACATAAAC
GTGCCCGAAG GTTTCGAGGT GAGCCTTTAT GCGGTCGTGC CGGACGCGCG ATCGATGGCC
GTGGCGCCGC AAGGTACGGT TACCTTCGTC GGCACGCGCA AGGACAAAGT ATGGTCGGTG
GTCGACCGCG ACCGCAACCG GGTTGCTGAC GAGGTCAAGG ACTTCGCGCC GTCCATAACC
TTCGACATTC CCAACGGCCC CTGCTTTTCG CGCGACGGCT TCCTCTACAT CGCCGAGCGC
AACCGGGTTC TTGCCTTCCC AGCAGCGGAG TTTTTCTTTG AAGGTCCAGA TCCGGCCGTC
GGCGTCGTCG TGGAGCAGGG TAAGCTAATC CCGCCAGAGG AAGAGAGTTT CAACCACACC
GCCCGGGTTT GCCGCGTCGG GCCTGATGGC AAGCTCTACA TCTCACTCGG ACAGCCGCAC
AATGTGCAGC CGGTGGATAA GCACGAGATG TACGACGAAA TCGGCATCGG CGGCATTATC
CGCATCAATA CGGACGGCAC GGGGCGCGAG GTTTATACCC GCGGCATCCG AAACTCTGTT
GGCCATGACT TCAACCCGGC AAATGGCGAC CTCTGGTTTA CCGATAACCA GGTCGACGGT
ATGGGTGACG ATATCCCGCC AGGCGAATTG AACCGGCAGA CAGAGGCAGG CCAGCACTTC
GGCTTCCCCT GGGTGAACGG CGCGATCGAG ATACCCGAAT ATAAGAACGT GCCGCGCCCC
GAAGGGGTTG AGTTCGTCCC GCCTGCAGTG GAAATGGACG CCCATGCCGC CGACCTCGGC
ATGAGCTTCT ACCGTGGCAA CTCGTTTCCC GAGAAATACC ACGGAGGCAT CTTCTCGGCC
CAGCATGGGT CGTGGAACCG AACGGTGCCT GTTGGAGCAC GGGTGATGTT CACGGCTCTT
GACGAAGAAG GCAATGCAAC CTCAACGGAA GTCTTCGCTG ACGGCTGGCT AAATCAGGAA
ACCGGCGAGT ACCACGGCCG TCCGATGGAC ATCGCCTTCC TGCCTGATGG CTCGATGCTC
GTCTCCGACG ACTTCGCCGG CGCGATCTGG CGGATCGCCT ATAATCCGGC GCGCCAATGA
 
Protein sequence
MISRKLVSGL LLNSMLAAPL AAQENLDKLS SMQRTDASFT FVDQEGDRAD ALKEIIQYIN 
VPEGFEVSLY AVVPDARSMA VAPQGTVTFV GTRKDKVWSV VDRDRNRVAD EVKDFAPSIT
FDIPNGPCFS RDGFLYIAER NRVLAFPAAE FFFEGPDPAV GVVVEQGKLI PPEEESFNHT
ARVCRVGPDG KLYISLGQPH NVQPVDKHEM YDEIGIGGII RINTDGTGRE VYTRGIRNSV
GHDFNPANGD LWFTDNQVDG MGDDIPPGEL NRQTEAGQHF GFPWVNGAIE IPEYKNVPRP
EGVEFVPPAV EMDAHAADLG MSFYRGNSFP EKYHGGIFSA QHGSWNRTVP VGARVMFTAL
DEEGNATSTE VFADGWLNQE TGEYHGRPMD IAFLPDGSML VSDDFAGAIW RIAYNPARQ