Gene Meso_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1572 
Symbol 
ID4180266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1693067 
End bp1694218 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content59% 
IMG OID638067464 
Productaromatic hydrocarbon degradation membrane protein 
Protein accessionYP_674133 
Protein GI110633925 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTCA GTCATCTTGC ATACTCATTT GTGGTTTTCC CATTTATCGT CGGCAGCGCT 
CAAGCCGGAG GGTTCTCGCG AGGCACCGCG GATACGGACA TCCTCTTCGA GGAGGGGAAC
GTCAATTTCC GTGCTGGGGC CTATATTGCC GTGCCCCATC AGGAATATCG CGCCGCACCG
CTGGCGGCTC CCAATCCGGC GCTAATCGGC GAAAATTACC TTGACACCTA TGTCATCCCG
TCGGCGGCCG TAAAGTTCGG CGTCGATGAC AAGTTTGCAT GCGCGGGAAC CTATACGGAT
TCCAATGGCG CCAGCTCCAG CTTCGCGGTC CCTTACGGCG TTAGCGGTAA GCTATCGGAG
TCCTTCATCG TGACCGAGTT CGGCGCAACG TGCGCCGCGT TCTTCGACAT GGGTCGAGGG
CGCCTCTCGC TGTTGGGGGG AGCCTTTATC GAAAAGCTCG ATTACACCCT TGATGCGCTA
CCCACTTTGC CCGGCTTGGG ACCAGTCCCG ATGGAGATCG GCCTCGACAG CGACGCTTAT
GGCTGGCGCG CCGGTATCGG CTATGAGATT CCGGATATCG CCCTTCGCGC GCAGCTTCTT
TATCGCTCTG GCACAACTCA CAATGCCACC GGCTCCGGCG GAACACCCCT TATTCCCGGG
GCCGAGCTGC CGGCTTTTGC CACGGGTGAA CTACCGCAAA GCGTGGAATT GAGGCTTCAA
TCCGGCATTG CGCCAGGGTG GCTGGCTTTC GGTTCGGTCA AATGGACAGA TTGGTCTGTC
AACGAGACGC TTGACCTCTC TGTTTCGACC GGCATTCCCG GCATCGGCGA CTTGAAAAGC
CGGAACGAAT ATTACTGGCG GGATGGCTGG ACGATTACCG GCGGCGTTGG GCACGCCTTC
AACGAAAGAG TGTCGGGCCT TGTCAGTCTC CAGTGGGACC GCGGCGTGAG TACCGGCTAT
GACCTGCGCA AGGACAAATG GCTGCTTGCC GCAGGCGCCA GCCTAAAGGA TCAGTGGGGC
GGCGAATTGC GGCTTGGAGG CGGCATCTCC TATCTCTCCT CCGCCGAAAT CACTGAAGGC
GTTGAAACCG GTGCCGCGGT GGATGCGGGC TGGGCTGCAC TCTTTTCCGC CAGTTACAGC
GTTAAATGGT GA
 
Protein sequence
MRFSHLAYSF VVFPFIVGSA QAGGFSRGTA DTDILFEEGN VNFRAGAYIA VPHQEYRAAP 
LAAPNPALIG ENYLDTYVIP SAAVKFGVDD KFACAGTYTD SNGASSSFAV PYGVSGKLSE
SFIVTEFGAT CAAFFDMGRG RLSLLGGAFI EKLDYTLDAL PTLPGLGPVP MEIGLDSDAY
GWRAGIGYEI PDIALRAQLL YRSGTTHNAT GSGGTPLIPG AELPAFATGE LPQSVELRLQ
SGIAPGWLAF GSVKWTDWSV NETLDLSVST GIPGIGDLKS RNEYYWRDGW TITGGVGHAF
NERVSGLVSL QWDRGVSTGY DLRKDKWLLA AGASLKDQWG GELRLGGGIS YLSSAEITEG
VETGAAVDAG WAALFSASYS VKW