| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1569 |
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| Symbol | |
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| ID | 4180107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 1687596 |
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| End bp | 1688981 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638067461 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_674130 |
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| Protein GI | 110633922 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.151598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACATTCT TGCGAAGCCG TATTGTGGCT GCCTTGGCTG CGACATCTGT GATTTTGTCC
CCGCTTCCGG CGAGTGCAGA AACGATCCTC GGAGCGCTGA CGAAAGCCTA CCAGAACAAT
TCCAGCCTGA ACTCATCGCG CGCGACCGTC CGCGTAACGG ATGAAAATGT TGCGATCGCC
AAATCCGGAA TGCGGCCCAG GGTGAGCGGC ACCGGTTCTT TGCAGCTGCA GAATCGGGAC
AGCACCGAGA TTCGCACAGG GCAGTTCGGC ATCTCGCTTC AACAGCCGAT CTTTGATGGA
TTTCAGACGC ATAATAACGT GCGCGCATCC GAGGCGCAGG TTCGCGCCGC AAACGAAAGT
TTGCGCAATG ACGAACTGAA CCTGCTTCTC AACGCCGCGA TAGCCTATAT GGATGTGATC
CGCGACAGGC AGATCGCCGC GCTGCGGTCA GAAAACCTTC AATTCCTCGA AGAGCAGGTC
CGATCCGCTC GTTCGCGGCT GGATGTGGGC GAGGGCACGC GTACGGATGT GGCGCAGGCG
GAAGCCAGCC GGCAATTGGC GCTGGCCCAG CTTGCGGCGG CAAGGGCGCA GGCGGCAGCA
AGTGCCGCGA CCTATCGTCA GCTGGTGGGA GATGATCCGG GAACCCTCGA GGCCCCTGAA
CCGCTGAGCC GATTGCTTCC GGCCGGGATC GATCAAGCCA CGGCCATCGC ACTTGCAGAA
CATCCGGCGA TCGCGGCCAG GCTTCACCAG GTCGACGCTG CAGCCTTCAG CGTGAAGTCC
GCGGAAGGTA CGCTCCTGCC CAACCTCTCT GCATCGGCCA GCCTCACGAC GACCCGGACC
GACACTTCCG GTGCGGCTGG CGCTGGCGGC CTTGCCGGCT CGAACGATGG CACCCAGAAC
AGTGCCTCGA TCGGGCTCAA CCTCACAATT CCGATTTACC AGGGTGGCGA AGCTTCCGCC
CGCGTCCGGC AATCAAAGGA ATCGCTTGGC AAAGCGCGGA TTGACGTGGA CGTTACCCGT
GATCAGGTGC GACAGGCTGT GACGTCCGCA TGGACACAAT ATCAGGCCGC AAGGGAGGCA
CTGGCTGCAA ACCGCGAGCA GGTGAATGCA GCCAGGCTTG CCTTGAGCGG CGTCATCGAG
GAACGCGATG TCGGTCAGCG TACGACGCTG GACGTCCTCA ATTCGCAGGC CGATGTCATC
GACGCGCGCA TAGAGCTTGT CAACGCGCAG CGTAACGTCG TCGTGGCGAG CTACGCTATC
GTTTCTGCTA TTGGGCGCCT TTCTCCATCC AGATTGGGTC TCAACGTCGC AACCTATGAC
CCGCAAGAGC ACTACAACGC CGTCAAGGAC AAGTGGTACG GCTTGAGGAC GCCGGACGGG
CGCTGA
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| Protein sequence | MTFLRSRIVA ALAATSVILS PLPASAETIL GALTKAYQNN SSLNSSRATV RVTDENVAIA
KSGMRPRVSG TGSLQLQNRD STEIRTGQFG ISLQQPIFDG FQTHNNVRAS EAQVRAANES
LRNDELNLLL NAAIAYMDVI RDRQIAALRS ENLQFLEEQV RSARSRLDVG EGTRTDVAQA
EASRQLALAQ LAAARAQAAA SAATYRQLVG DDPGTLEAPE PLSRLLPAGI DQATAIALAE
HPAIAARLHQ VDAAAFSVKS AEGTLLPNLS ASASLTTTRT DTSGAAGAGG LAGSNDGTQN
SASIGLNLTI PIYQGGEASA RVRQSKESLG KARIDVDVTR DQVRQAVTSA WTQYQAAREA
LAANREQVNA ARLALSGVIE ERDVGQRTTL DVLNSQADVI DARIELVNAQ RNVVVASYAI
VSAIGRLSPS RLGLNVATYD PQEHYNAVKD KWYGLRTPDG R
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