Gene Meso_1543 details

Gene Information

• Locus tag: Meso_1543
• ID: 4180588
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 1661813
• End bp: 1662499
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 638067434
• Product: ABC-type uncharacterized transport system auxiliary component-like
• Protein accession: YP_674104
• Protein GI: 110633896
• COG category: [R] General function prediction only
• COG ID: [COG3218] ABC-type uncharacterized transport system, auxiliary component

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0904417
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGGCG GGCGCGCCGT TGACAGTTTC AGCATCATCC GCAAGAAGGA TCGAACGGGG 
CCGAATCCGT CTTTCGGGAG CAAGCGGTTG GGTTTGAAGC GGGGTTATAG CGGGCTGGTG 
ATCCTGAGCC TGATGCTCGG CGGATGCGCC GCTATCCCGG GCTTTGGTCC CGCCCCGGTA 
GACGTCTATG ATCTTACGGC GCCGGCGCTT CAGCTCGCTG CCGCCAGGCG CGCGCGCACT 
CAGGTCCTGG TTCCGGAGCC GGAAGCATTG AAAATATTGG ATGGTGAGGA CATCGCCATC 
CGCACATCGA CTGGCGCGCT TCAGCTTCTA GGTGGCGCAC GCTGGTCGGA CCGGCTGCCC 
CGGCTGGTGC AGTCGGGACT GGTGGAAGCC TATCAGAAAT CCGGCAGCTT TGCCGGCGTC 
GGAAGGCCCG GTGAAGGGCT CGCGATCGAT TATCAGGTGA TCGTCGATAT CCGCACCTTC 
GAGGTGCAGG TGGGGAACGG TTTGGCCCAA GTTCAGCTTT TCGTGCGTGT TCTCGACGAC 
CGCACCGGCC AAGTCCGTGC GTCTCGCGAT TTCACGACCA GCGCACCGGT TGTCGGAAGC 
GGGGACGTGG CGTTCGTGGC AGCTCTCAAT CAGGCATTCA ATGCGGCAAC GCGTGAAATC 
GTCGACTGGT CCCGTAGCGT GATGTAG 

 

Protein sequence

MTGGRAVDSF SIIRKKDRTG PNPSFGSKRL GLKRGYSGLV ILSLMLGGCA AIPGFGPAPV 
DVYDLTAPAL QLAAARRART QVLVPEPEAL KILDGEDIAI RTSTGALQLL GGARWSDRLP 
RLVQSGLVEA YQKSGSFAGV GRPGEGLAID YQVIVDIRTF EVQVGNGLAQ VQLFVRVLDD 
RTGQVRASRD FTTSAPVVGS GDVAFVAALN QAFNAATREI VDWSRSVM