Gene Meso_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1540 
Symbol 
ID4180585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1658410 
End bp1659597 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content62% 
IMG OID638067431 
Producthypothetical protein 
Protein accessionYP_674101 
Protein GI110633893 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein
[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.435512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTTCA GCATTATGAC CCGGAGAAAC GGAACTGCCC AGGAGCGCGA TCCAACCGCG 
CCGGACCTGG AATTGCGCGA GGAAAACGGC GCGCTTGTCT GCCGGCTGTC AGGCAATTGG
ACCACGCGCA CCGTGAGCCT CGTCGATGAT CCCATGCGCA GGCTGCGCGC TCGCAAGGGT
CTGACGCATT TCATCATCGA TCTCGGAGAT GTTGGGCATC TCGACACTGC CGGCGCATGG
TTGGTGTCGC GACTCGCCGC TGCCCAGAAG GAGAATGGAG CGCAGGTCGA GATAAGCGGC
CAGTCGGAGG CTGCCTCCAT CCTGCTTGCG GCGATCGAGC CTACCGCGCA AGAGCCGGAC
GTGCCGAAGG ATGGGCGGCG GGGCAATCTG ATCGTCAACA TCCTGGCAGC CATGGGCCGC
ACCATCTACG ACATCAAGGA TGATGTGCTC TACGGGATGC ACATTCTGGG AGCCACGATC
AGCGGCGCAC AGATGAAGCT CGGGCGCGGC CATGCCGTAA ATCCCGCGGC CATCGCCAAC
CAGATCGACC GCATGGGCGT TGGCTCGATT CCCATCATCG TGCTGATGTC GGCGGTCGTG
GGCGCGATTA TCGCGCAGCA GGGCGCCTTC CAGCTGCGGT GGTTCGGCGC TGAAATTTAC
GTTGTGGACC TCGTCGGAAT CCTGATTCTG CGCGAACTCG GCGTGCTGCT CACGGCAATC
ATGATCGCCG GCCGTTCGGG CAGCGCCATC ACCGCCGAGA TCGGATCCAT GAAGATGCGC
GAGGAGGTGG ACGCACTGAC CGTTATCGGG CTTAACCCGG TCGGAGTGCT GGTCTTTCCT
CGCCTCGTCG CGCTCGTAGT GGCGGTACCC TGCCTCACGA TCGTCGCCAA TTTCTCCGCC
CTCGGCGGCG CCATTCTGGT GGCTTGGCTC TATTCCGACA TTATGCCCGC CACCTTCATC
CAGCGCCTCC ACGATGCGAT CGACCTGACG AGCATCTTCG CCGGCTTGAT CAAGGCCCCC
TTCATGGCCC TCATCATCGG CATCATCGCT TCAGTGGAAG GCATGAAGGT GGGCGGCAGC
GCGGAATCGC TTGGCAAGCA TGTGACCGCC TCCGTCGTGA AAACGATTTT CCTCGTCATC
GTTATCGATG GCCTTTTCGC CATGTTCTAC GCAGCGATCG ACTTCTAA
 
Protein sequence
MVFSIMTRRN GTAQERDPTA PDLELREENG ALVCRLSGNW TTRTVSLVDD PMRRLRARKG 
LTHFIIDLGD VGHLDTAGAW LVSRLAAAQK ENGAQVEISG QSEAASILLA AIEPTAQEPD
VPKDGRRGNL IVNILAAMGR TIYDIKDDVL YGMHILGATI SGAQMKLGRG HAVNPAAIAN
QIDRMGVGSI PIIVLMSAVV GAIIAQQGAF QLRWFGAEIY VVDLVGILIL RELGVLLTAI
MIAGRSGSAI TAEIGSMKMR EEVDALTVIG LNPVGVLVFP RLVALVVAVP CLTIVANFSA
LGGAILVAWL YSDIMPATFI QRLHDAIDLT SIFAGLIKAP FMALIIGIIA SVEGMKVGGS
AESLGKHVTA SVVKTIFLVI VIDGLFAMFY AAIDF