| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1525 |
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| Symbol | |
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| ID | 4180648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 1642755 |
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| End bp | 1643606 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638067416 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_674086 |
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| Protein GI | 110633878 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.623157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGC AAACACTTCC CAAACAGGAG CAGGAGCACC AGCCGGGCAA AGAGCATCAA
ATGCATCCGC GGCCGGAATT CACGCCTCGG TATCGCGGCT CGGACCGCTT GAAGGATAAA
GTGGCGGTGA TTACCGGCGG AGATTCCGGC ATTGGCCGCG CGACCGCCAT TCTCTTTGCT
CGCGAGGGAG CCAAGGTGGC TTTCCTCTAT AGGGACGAAC AGAAGGATGC CGAGGAAACC
GAACGGCTGG TTGCCGCCGA AGGCGGCGAT GTCTTCTCAA TGCCAGGAGA TGTCGGGGAA
ACCGAGACGG CTGAGCGCTT CGTCAAAGCG GTGATCGAGC GGTTCGGGAA GATCGATGTC
CTCGTGAACA ATGCCGCCGA GCAGCATTAT CAGGAAGAGC TGACTGATAT CTCAGACGAA
CAGCTGGAGC GCACCTATAA AACCAATATC TTCGGTATGT TCCGAATAAC GCGGGCTGCC
CTTCCGCACA TGCAAGAGGG CTCTTCCATC ATCTGCACAA CCTCCGTTAC CGCGTTCAAA
GGACAGGATG TCCTGATGGA CTACGCTTCG ACCAAGGGGG CCATCCTCGC CTTTGTGCGT
GCGCTATCGG GTAATCTTGC TTCGAAGGGA ATCCGCGTGA ACGCGGTCGC GCCGGGTCCG
ATCTGGACGC CGCTCATCCC GGCATCTTTC CCCGCCGAGA AGGTCGCCAA GTTTGGCGGC
AACGTGCCGC TCGGACGGCC GGGTCAGCCC AATGAAGTGG CGCCTTGCAT GTTGTTCCTC
GCCTGCGAGG ATTCATCCTA CATCACTGGC CAGACGCTGC ATCCGAACGG CGGAACGCTT
GTGGGCGGAT AA
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| Protein sequence | MSEQTLPKQE QEHQPGKEHQ MHPRPEFTPR YRGSDRLKDK VAVITGGDSG IGRATAILFA
REGAKVAFLY RDEQKDAEET ERLVAAEGGD VFSMPGDVGE TETAERFVKA VIERFGKIDV
LVNNAAEQHY QEELTDISDE QLERTYKTNI FGMFRITRAA LPHMQEGSSI ICTTSVTAFK
GQDVLMDYAS TKGAILAFVR ALSGNLASKG IRVNAVAPGP IWTPLIPASF PAEKVAKFGG
NVPLGRPGQP NEVAPCMLFL ACEDSSYITG QTLHPNGGTL VGG
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