| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1473 |
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| Symbol | |
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| ID | 4179297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 1570837 |
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| End bp | 1572102 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638067363 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_674034 |
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| Protein GI | 110633826 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.378859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACA TGGCCTGGAT CGAGACTGCA CTGACGGGCG CGCGCCCGCA GGCGATGGGT
GCGCTTCTGC GCTATTTTCG CGATCTCGAC CGGGCGGAAG AGGCGTTTCA GGAGGCCTGC
CTGCGCGCCA TGAGGACATG GCCGGTGAAA GGGCCGCCGC GCGATCCCGC CGCCTGGCTC
ATCTTCGTCG GCCGCAATGC GGCGCTCGAT TCGGTGCGCC GCGACAGCCG CAACACGGCG
CTGCCCGAAG ACTCGGCGAT TTCCGAGCTC GGCGACGCCG AGGCGGACAT GGCTGAAAGG
CTCGACGATT CTCACTACCG GGACGACATC CTGCGGCTGA TGTTCATCTG CTGCCATCCG
GATCTTCCGG CTACCCAGCA GGTGGCGCTG GCGCTGCGCA TCGTCTCGGG CCTCTCGGTG
CGGGAGATCG CAAGCGCCTT CCTCGTCAAC GAAAAAGCAA TGGAGCAGCG CATCACCCGA
GCCAAGCGCC GTGTGAGCGA GGCGAATGTG GCATTCGGGG CACCGGGCGC GGCGGAACGC
GCCGAACGGC TCGCGGCTGT GGCCGCCATG ATCTACCTGA TCTTCAACGA AGGTTACTCC
GCAAGCGGCG GGGAAGTGCA TGTGCGCGAA CCGCTCTGCA ACGAGGCGAT CCGGCTGGCG
CGGCTTCTTT TGAGACTGTT CCCGGCCGAG CCGGAGGTCA TGGGGCTCTT GGCGCTGATG
CTCCTGCAGC ATGCCCGAAC GCCAGCACGC ATCGATGGCA ACGGCGATAT CGTGCTCCTG
GAGGAGCAGG ATCGAAGCCA GTGGAACCGC GATATGATCA CGGAGGGACT GGCGCTGGTG
GACAAGGCTA TGCGCCACCG CAAGCCCGGC ATCTATCAGG TGCAGGCGGC GATCGCGGCG
CTTCATGCGC GGGCGGCCAA GCCCGAGGAT ACGGATTGGC AGGAGATCAA TCTCCTCTAT
CAAATGCTGG AGCGGCTGCA GCCCTCGCCC GTCATCCGGC TCAATCGCGC AGTCGCCCTG
TTCAAGACGC AAGGACCGGA AGCCGCGCTG CTGCTCATCG AGCCGTTGGA GGAGCGCCTT
TCCAACTATT TCTATTTCCA CGGCGTGCGC GGCGCGCTTT TGATGGAACT CGGCCGGGAG
CGGGAAGCGC GGACGGCCTT CGACAAGGCT ATATCGCTCG CGCGCACGCC GGCCGAGGCA
GCGCATATCC GTCAGCAGAT CGACCGGCTG ATCAGCGACG CGAAGCCGCG GGCAAAGTCC
GCCTAA
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| Protein sequence | MNDMAWIETA LTGARPQAMG ALLRYFRDLD RAEEAFQEAC LRAMRTWPVK GPPRDPAAWL
IFVGRNAALD SVRRDSRNTA LPEDSAISEL GDAEADMAER LDDSHYRDDI LRLMFICCHP
DLPATQQVAL ALRIVSGLSV REIASAFLVN EKAMEQRITR AKRRVSEANV AFGAPGAAER
AERLAAVAAM IYLIFNEGYS ASGGEVHVRE PLCNEAIRLA RLLLRLFPAE PEVMGLLALM
LLQHARTPAR IDGNGDIVLL EEQDRSQWNR DMITEGLALV DKAMRHRKPG IYQVQAAIAA
LHARAAKPED TDWQEINLLY QMLERLQPSP VIRLNRAVAL FKTQGPEAAL LLIEPLEERL
SNYFYFHGVR GALLMELGRE REARTAFDKA ISLARTPAEA AHIRQQIDRL ISDAKPRAKS
A
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