Gene Meso_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1456 
Symbol 
ID4179319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1551871 
End bp1552572 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content62% 
IMG OID638067345 
Productsugar fermentation stimulation protein A 
Protein accessionYP_674017 
Protein GI110633809 
COG category[R] General function prediction only 
COG ID[COG1489] DNA-binding protein, stimulates sugar fermentation 
TIGRFAM ID[TIGR00230] sugar fermentation stimulation protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTTC CCTCCCCGCT CACCGAAGCC CGGCTCATCC GCCGCTATAA GCGCTTTCTG 
GCCGATGTAG TGCTTGCGGA CGGAACGGAA CTTACGGTTT CAGTGCCCAA TACCGGATCG
ATGCTCGGGC TCACCGCGCC GGGATCGCGC GTGCTCTTGT CGAAATGGGA CGATCCGAAA
CGCAAATATC CCTATCGGCT GGAAATCGTG GAAGCGGACG GAACGCTGGT GGGTATCAAT
ACAGGCCTGC CGAACCGGCT TGCGGCGGAG GCTATCCGCG CCCGTCTGGT GGGCGACCTC
GGCACATATC CGGTGATACG GCCCGAACAG CGCTATGGCG AGCGCTCGCG CATCGACTTT
CTTCTGGAGC ACCCGGAGCG CCCGCCAGCC TATGTGGAGG TGAAAAACGT GCATTTCATG
CGCGAGGCCG GGCTTGCCGA ATTTCCGGAT ACGAGGACGG ACCGCGGCGC CCGGCACCTC
GACGAGCTTG CAGCCATGCG CAGGGCAGGC AACCGCGCCG TCATGATCTA TGTGGTCCAG
CGGGCCGATT GCTCCCGATT CCGCCTTTGC GCGGATCTTG ACGCCTCTTA TGCCGCGGCT
TTCGGGCGCG CGAGGGATGC GGGGGTTGAA GCTTTCGTGA TAGGGTGCCA AATCTCTGCC
GACGCGATCG CTCCCGATCG CCTGATCGAT TTGGATTTTT AG
 
Protein sequence
MIFPSPLTEA RLIRRYKRFL ADVVLADGTE LTVSVPNTGS MLGLTAPGSR VLLSKWDDPK 
RKYPYRLEIV EADGTLVGIN TGLPNRLAAE AIRARLVGDL GTYPVIRPEQ RYGERSRIDF
LLEHPERPPA YVEVKNVHFM REAGLAEFPD TRTDRGARHL DELAAMRRAG NRAVMIYVVQ
RADCSRFRLC ADLDASYAAA FGRARDAGVE AFVIGCQISA DAIAPDRLID LDF