| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1416 |
|---|
| Symbol | |
|---|
| ID | 4179377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1513958 |
|---|
| End bp | 1515022 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638067305 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_673977 |
|---|
| Protein GI | 110633769 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3768] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR01620] conserved hypothetical protein, TIGR01620 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.80798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC CGCGCCGCCC CGCCGCATTC CGGATTGAGC CCGCGCCCTC CCCCTCTCCC
GAGGCGACGC GGGAAGACGT ACGCAAGCCG CGCGCCATAA GAGTGGACGA GGCGGTCAAG
ATCACGCCGG CCGAGATCGA CATCTTCGAT TCTCTGGAGA CTGAAGCTTC CGCTCCGCCG
CCCGCGGCAG CTCCGAAAAG GCGCTCACGC CTCGGTGCCG TTTTCGTGGC GGCGCTGGGA
ATGCTCGTCT CCCTGGCAGC GGGACTTTGG GCGGACAGTC TCATCCGCGA CCTCTTCTCC
CGCGCCGATT GGCTTGGCTG GCTGGGTGCG GCGCTCGTAG CAGTCGCGGC GCTGGCGCTG
TTTGCGATCG TCGTGCGCGA GGCCATCGCG GTCGCGCGGC TTGCTTCCGT TGAAAGGATG
CGGCGGCGCT CCGACGACGC TTATGAGCGT GACGATGCCA GGCAAGCGCG GGCGGTGATC
GCGGATCTGT CCTCGCTGCT TGCAAGCCAC CCCGACACGG CCGCAGGGCG GCGGCAACTG
GAACAGCTGG AGGGCGACGT CATCGACGGA CGCGACCTCC TGCGGATTGC CGAAAAGGAA
CTCCTGGCGC CCCTCGACAA GCGTGCTCAG AAACTGGTGC TCGATGCCGC CAAGCGCGTT
TCGGTTGTAA CGGCGGTCAG CCCTCGGGCG CTGATGGATG TCGGCTATGT CATCTTCGAA
GCGGTGCGCC TGCTCCGCCG CCTGTCCGAG CTCTATTGCG GCCGCCCGGG CTTTTTCGGA
TTCCTGCGGC TGTCACGCAA CGTGCTCGCC CATCTCGCCG TCACCGGCTC CATGGCAATG
GGCGATACGA TTGTGCAGCA GATCGTGGGG CACGGAATTG CTGCCCGCCT TTCGGCCCGG
CTCGGCGAGG GGGTGGTGAA CGGCATGATG ACGGCGCGCA TCGGCATGGC TGCCATTTCG
GCGATACGCC CGCTTTCCTT CCGCGCTGTC GAGCGGCCCG GAATCGGCGA TTTCCTGAAG
GCGCTTACTC AATTCGCGGC CAAAACCGAC GGCAAACGAA CCTGA
|
|---|
| Protein sequence | MSEPRRPAAF RIEPAPSPSP EATREDVRKP RAIRVDEAVK ITPAEIDIFD SLETEASAPP
PAAAPKRRSR LGAVFVAALG MLVSLAAGLW ADSLIRDLFS RADWLGWLGA ALVAVAALAL
FAIVVREAIA VARLASVERM RRRSDDAYER DDARQARAVI ADLSSLLASH PDTAAGRRQL
EQLEGDVIDG RDLLRIAEKE LLAPLDKRAQ KLVLDAAKRV SVVTAVSPRA LMDVGYVIFE
AVRLLRRLSE LYCGRPGFFG FLRLSRNVLA HLAVTGSMAM GDTIVQQIVG HGIAARLSAR
LGEGVVNGMM TARIGMAAIS AIRPLSFRAV ERPGIGDFLK ALTQFAAKTD GKRT
|
|---|
| |