Gene Meso_1389 details

Gene Information

• Locus tag: Meso_1389
• Symbol: lpxD
• ID: 4181236
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 1483159
• End bp: 1484256
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 638067278
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_673950
• Protein GI: 110633742
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.11769
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGTCCG GGCGGCCTGA CGGTGCGCCC GGACGAGAAG GCATCATGAC GGAACCGGCT 
TTTTTTGCTC CCGCACGCCG CTTTGAGGTG GGCGAGATTG CTGCCTTGAC GGGCGCGCGC 
CTGAGGGATG CCTCGCAGGA AAAGATCACG ATCAGCCGAT TGGCGCCCGC TGCCGAGGGC 
GGCGAGGAAA CATTGGTTTT CATCGACGGA AGGCGCCATG CCTCCCGGAT TGGTTCGGTG 
CGCGCGGCGG CGCTCTTGTG CTCGGAAGAG TTGGCGGAAA ATGCGCCGGA CGGGGTCGCG 
GTGCTTGTCA GCCCGAAGCC GCAGCAGGCC TTTGCCATGG TGGCGCGCCT CCTCTTTCCC 
GAGGCAAACC GGCCGCAGCC GGTAACTGGC GAGACGGGGG TCTCCCCACG GGCCGTGATC 
GCCGAGGGAG CTGTCGTCGA GGACGGCGCG ATCATAGAGG CAGGCGCGGT GATCGGCGTC 
GGCGCCTCGG TGGGGCGCGG AACGATTGTG GGCCCAAACA CCGTTATCGG CGCCCGCTGC 
AGCATCGGCC GCGACGGCTA TGTGGGGCCG AACGTGATGC TGCAATATGC TGTCATCGGA 
GATCGCGTCA TTATCCATCC TGGCGCGCAG ATCGGGCAGG ACGGGTTCGG CTTCCTGCCG 
GGGCCGAACG GGTTCGAGAA GAACCCGCAG ATCGGCCGCG TGATCATTCA GGATGACGTT 
GAAATCGGCG CCAACACCAC CATCGACCGC GGCGCTCTGT CCGACACCAT AATCGGCGAG 
GGCACCAAGA TCGATAATCT TGTGCAAATC GGGCACAACG TGCATATCGG CCGACGCTGC 
GTCATCGCCG GCCTTTGCGG TCTCTCGGGC TCGGTTAAGC TCGGCGACTA TGTCATGCTC 
GGCGGGCAGG TGGGCATTGC CGATCACATT ACGATCGGCA ATCGCGCGCA GCTCGCCGCC 
TCGAGCGGTG TGATGGACGA TGTACCCGAA GGCGAAAGAT GGGCCGGCGT GCCGGCCAAG 
CCCATGCGGC AGGCGTTCCG CGAAATCGCG GCGCTGCGCA GCCTGGTGCA GGATATGCGG 
AAGGGGAGTA AGGGATAA 

 

Protein sequence

MLSGRPDGAP GREGIMTEPA FFAPARRFEV GEIAALTGAR LRDASQEKIT ISRLAPAAEG 
GEETLVFIDG RRHASRIGSV RAAALLCSEE LAENAPDGVA VLVSPKPQQA FAMVARLLFP 
EANRPQPVTG ETGVSPRAVI AEGAVVEDGA IIEAGAVIGV GASVGRGTIV GPNTVIGARC 
SIGRDGYVGP NVMLQYAVIG DRVIIHPGAQ IGQDGFGFLP GPNGFEKNPQ IGRVIIQDDV 
EIGANTTIDR GALSDTIIGE GTKIDNLVQI GHNVHIGRRC VIAGLCGLSG SVKLGDYVML 
GGQVGIADHI TIGNRAQLAA SSGVMDDVPE GERWAGVPAK PMRQAFREIA ALRSLVQDMR 
KGSKG