Gene Meso_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1385 
Symbol 
ID4181232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1477727 
End bp1478440 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content62% 
IMG OID638067274 
Productundecaprenyl pyrophosphate synthetase 
Protein accessionYP_673946 
Protein GI110633738 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.16161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACCCG CGCATATCGC GATCATCATG GATGGAAACG GCCGCTGGGC GCGCGCCCGC 
GGTCTTCCGC GAAGCGCTGG TCATCGCGCG GGCGTCGAGG CGCTGCGCCG GACGGTGCGT
GCCGCCGGCG AGATGGGTAT CCGGTGGCTC ACCGTCTACG CTTTTTCGTC CGAGAACTGG
TCGCGGCCGA AATCGGAAAT CAGCGACCTC ATGGGGCTTT TGAAGCTGTT CATTCGCCGC
GACCTGGCGG AACTGCATCA AAGCGGCGTG CGGGTGCGCA TCGTCGGCAG TCGTGAGGGC
CTGGAGCCCG ATATTTCGGC GCTTCTGCTG GAAGCAGAGA ACCTGACCGC CGGCAACACC
AACATGAACC TCGCCGTCGC TTTTAACTAT GGCTCACGCG ATGAGATTCT GCGCGCGGCG
CGCGCGGTGG CCTTGGAAGC CAAGGCAGGC CGACTCGATC CTGAGAAGAT GACGGCGGAA
GAATTTTCCG CGCGCCTTGA TACCGTCGGG ATGCCCGATC CCGATCTCAT TATCCGGACG
AGTGGAGAGC AGAGGCTTTC CAATTTCCTT CTTTGGCAAG CTGCTTATAC GGAATTCGTG
TTTCTTCCCT GCCATTGGCC GGACTTCGGT CCGGGCGATC TGGCGGCGGC CATCAGCCTT
TTTGAAGAAA GGGACCGCCG CTTCGGCAGT ATCGCTCAAG AAGCGGCCTC ATGA
 
Protein sequence
MKPAHIAIIM DGNGRWARAR GLPRSAGHRA GVEALRRTVR AAGEMGIRWL TVYAFSSENW 
SRPKSEISDL MGLLKLFIRR DLAELHQSGV RVRIVGSREG LEPDISALLL EAENLTAGNT
NMNLAVAFNY GSRDEILRAA RAVALEAKAG RLDPEKMTAE EFSARLDTVG MPDPDLIIRT
SGEQRLSNFL LWQAAYTEFV FLPCHWPDFG PGDLAAAISL FEERDRRFGS IAQEAAS