| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1367 |
|---|
| Symbol | |
|---|
| ID | 4181562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 1459943 |
|---|
| End bp | 1461343 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638067256 |
|---|
| Product | L-serine ammonia-lyase |
|---|
| Protein accession | YP_673928 |
|---|
| Protein GI | 110633720 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1760] L-serine deaminase |
|---|
| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCTTT CAGTCTTCGA TCTTTTCAAG ATCGGCATCG GTCCGTCGAG TTCACATACG
ATGGGGCCGA TGGTAGCCGC AGAGCGCTTT CTGCGCGAAA TCGCGGAAGG GGAGTGGCCG
CGGCCGGCGG GCGTGCAAGT CAATCGGCTG TCCGTCAGCC TGCACGGCTC GCTCGCATTC
ACGGGTGTGG GACACGCTAC CGACCGCGCC GCGATCCTTG GGCTGCAAGG TTTCACACCG
ACGACGGTGG ACCCGGACCA GGCGGATTCC ATTCTGGAAC AAATCGGCAG CACAAAGCGG
CTTTCGCCCG CCGGACATCC CGAATACCGC TTCGACCCCG AGACGGATCT CGTCTTTGAC
AGGAAGGCGC CTCTGCCCGG CCATGCGAAT GGAATGGCGT TCAGCGCTTT CGATGCGGAT
GATCGGCTGC TTTTGCGACG CGTCTATTAC TCCGTGGGCG GCGGGTTCGT AGTCTCGCAG
GAGGAGCTTG AAGCGCTGAA GGCCGAGAAG AGGCCGGGCG CGGATAGCAG CGTCCCCTAT
CCCTTTACCA ATGCCCGCCA GATGCTGGAG ATGGCCGCCT CAAGCGGCCT CTCGATCGCC
GAGATGAAGC GTGCCAACGA GCTGGCTCAC AGAAGCGCTC AGGAACTTGA CGCGGGCCTC
GATCGCATTT GGGACGCCAT GCATGGCTGC ATCGAGCGCG GGCTGACGCA GGAAGGCATC
ATGCCGGGCG GGCTGAAAGT GCGCCGCCGC GCGCGTGAAC TGCACCGCAA GCTGGAAGAG
GAATGGCGGC AGAACAGGCC CAACCCCCTT GCCGCCAATG ACTGGCTTTC CGTTTATGCC
ATGGCCGTCA ATGAAGAGAA CGCGGCGGGC GGAAGGGTCG TCACCGCTCC CACCAACGGC
GCGGCGGGCG TCGTGCCGGC GGTGATGCGC TACTGGCTGC GGTTCCATCC CGAGGCAGAC
AGGAACGGCA TTCGCGATTT CCTGCTCACT GCCGCGGCGA TTGGCGGACT CATCAAATTC
AATGCGTCGA TTTCCGGCGC GGAGGTGGGC TGCCAGGGGG AAGTGGGCTC CGCCTCGGCC
ATGGCGGCGG CGGGGCTGGC CGCGGTCATG GGCGGCACGC CCGAGCAAGT GGAAAACGCG
GCCGAGATCG CGTTGGAACA CCATCTTGGC ATGACCTGCG ACCCGGTGGC CGGTCTCGTG
CAAGTGCCCT GCATCGAGCG TAATGCGCTG GGTGCGGTCA AGGCTGTTAC GGCGGCATCT
CTGGCCATCA AAGGCGACGG CCAGCATTTC GTATCGCTGG ACGCCGCGGT CGAGACCATG
CGCCAGACGG GGCTCGATAT GAACGAGCGC TATAAGGAAA CAAGTCTCGG CGGGCTTGCG
GTCAATGTAG TAGAATGCTG A
|
|---|
| Protein sequence | MFLSVFDLFK IGIGPSSSHT MGPMVAAERF LREIAEGEWP RPAGVQVNRL SVSLHGSLAF
TGVGHATDRA AILGLQGFTP TTVDPDQADS ILEQIGSTKR LSPAGHPEYR FDPETDLVFD
RKAPLPGHAN GMAFSAFDAD DRLLLRRVYY SVGGGFVVSQ EELEALKAEK RPGADSSVPY
PFTNARQMLE MAASSGLSIA EMKRANELAH RSAQELDAGL DRIWDAMHGC IERGLTQEGI
MPGGLKVRRR ARELHRKLEE EWRQNRPNPL AANDWLSVYA MAVNEENAAG GRVVTAPTNG
AAGVVPAVMR YWLRFHPEAD RNGIRDFLLT AAAIGGLIKF NASISGAEVG CQGEVGSASA
MAAAGLAAVM GGTPEQVENA AEIALEHHLG MTCDPVAGLV QVPCIERNAL GAVKAVTAAS
LAIKGDGQHF VSLDAAVETM RQTGLDMNER YKETSLGGLA VNVVEC
|
|---|
| |