Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1354 |
Symbol | |
ID | 4181588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1446096 |
End bp | 1448645 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638067243 |
Product | DNA topoisomerase I |
Protein accession | YP_673915 |
Protein GI | 110633707 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.75959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGTCG TCGTCGTCGA ATCGCCTGCA AAGGCGAAAA CTATCAACAA ATATCTGGGG AAGGATTACA AGGTCCTGGC TTCCTTCGGC CATGTCCGCG ATCTCCCGGC TAAGGATGGC TCCGTCCGCC CGGAAGAAGA CTTCGCCATG TCCTGGGAGG TCGACAGCCC CTCGGCCAAG AGGCTTGCCG ACATTGCAAA GGCGGTCAAG GACGCCGACG GCCTGATCCT CGCCACCGAC CCCGACCGCG AAGGCGAAGC CATCTCCTGG CATGTTCTGG AAGTTCTGCG CCAGAAGCGG GCGCTCAAGG ACAAGCCGGT CCGCCGCGTG GTCTTCAACG CCATCACCAA GAAAGCGATC CTCGACGCGA TGGCCTCCCC GCGCGAGGTC GACGCTTCGC TGGTAGACGC CTATCTCGCC CGTCGCGCGC TCGATTACCT CGTGGGCTTC ACGCTTTCTC CGGTCCTCTG GCGCAAGCTG CCGGGCGCCC GCTCGGCCGG CCGCGTCCAG TCCGTGGCGC TGCGCCTCGT TTGCGACCTC GAGGCGGAGA TCGAGCGCTT CGTGCGCGAG GATTACTGGC AGATCGCCGC CCTTCTCGAC ACGCCGCGTG GCGATAGCTT CGAGGCCCGG CTTACCACGC TGGACGGCAA GAGGCTGCAG AAGCTCGACA TCAAAAGTCA GGAAGAAGCG GACTCGATCA AGGCGCTGCT CGACGGTGCG GCCTATCGGG TGCTTTCGGT CGAGGCGAAG CCGACGCGCC GCAACCCTGG CCCGCCGTTC ACAACATCCA CGCTGCAGCA GGCCGCCTCC TCACGGCTGA GCTTTTCTGC CTCGCGCACC ATGCAGGTCG CCCAGCGGCT CTATGAAGGC GTCGAGATCG GCGGGGAAAC CACCGGCCTC ATCACCTATA TGCGTACGGA TGGGGTGCAG ATGGCGCCCG AGGCCATCGA AGCGGCCCGT TCCGCCGTAT CCAACACTTT CGGCCCGCGA TACCTGCCCG AAAAGCCGCG CCATTATTCG AGCAAGGCCA AGAACGCGCA GGAAGCGCAC GAGGCGATCC GCCCGACCGA CTTCTCCCGC ACGCCGGACG AGGTGCGCAA ATACCTCGAT TCCGACCAGG CCAGGCTTTA CGAGATGATC TGGAAGCGCG CCATCGCCAG CCAGATGGAG GCGGCGGAGA TCGAGCGGAC CACTGTCGAG ATCGAGGCTT CGGGCGCTGG CCGCGCGGCG GGACTACGGG CGGTGGGCTC CGTCGTCCGC TTTGACGGCT TTCTTGCGGC CTATGCCGAG GTGAAGGACG AGGACTCCCA GGACGAGGAG GACCGTCGCC TTCCGGAGAT CAACAGCGGC GAGGCGCTGA AGCGCAACTC GGTCAATGTC ACCAAGCACA CAACCGAGCC GCCGCCGCGC TATTCGGAAG CTTCGCTTAT CAAGAAGCTC GAGGAACTCG GCATCGGCCG GCCCTCCACC TATGCGGCTA TCCTGAAGAC GCTGGACGAT CGCGGCTATG TCTCCAATGA GAGGCGCAAG CTCGTACCGC AGGCCAAGGG CCGTATCGTT ACGGCTTTCC TTGAGAACTT CTTCCGCCGT TATGTGGAAT ATGATTTCAC GGCCGACCTT GAGGAAAAGC TGGATGAAAT CTCGGACGGT AAGCTTTCGT GGAAACAGGT GTTGCGCGAT TTCTGGAAGG ACTTTTCCGC CGCCGTCGGG GATATCAAGG AGCTGCGCGT TACCGATGTG CTCGACGCCC TGAACGAGGA ACTGGCGCCG CTCGTCTTTC CGACGCGTGA GGATGGTGGC GATCCGCGCA TCTGCCCCAA ATGCGGAGCC GGCAAGCTTT CACTGAAGCT TGGACGATAC GGTGCCTTTG TCGGCTGTTC CAACTACCCG GAATGCGACT ATACGCGCCA GCTTGGCGAG AACCCGGCGG AAAATGGCGA GGCGGAAGCA GGCCTCAATG GGAACAAGGT GCTGGGCACC GATCCCTTCA CCGGCGAAGA GATCACGCTG CGGTCCGGCC GCTTCGGGCC TTACGTCCAA AGGGGCGAAG GGAAAGACGC CAAGCGAGCG GGCCTGCCCA AAGGCTGGAC GCCTGAAGAT CTCGACCATG AGAAGGCCAT CGCCCTGCTT TCACTGCCGC GGGATGTCGG CAAGCATCCG GAAACCGGCA AGATGATTTC CGCCGGCATC GGCCGCTATG GGCCTTTCCT GCTGCATGAC GGTACATATG CGAATCTGGA GACGGTCGAA GATGTGTTCT CGGTCGGCCT CAACCGCGCT GTTTCGCTGC TGGCCGAAAA GCAGGCGAAG ACCAACGGCG CCCGCGCAAA ACCGGCCGCT TTGAAGGAGC TCGGGGAACA TCCGGACGGT GGAGTGATTA CCGTGCGTGA CGGCCGCTTC GGGCCCTATG TCAATGTCGG CAAGGTGAAC GCTACTTTGC CCAAGGGCAA GGATCCGATG TCTTTGACCC GCGAGGAGGC GCTGGAACTC CTCGCTGCCA AGGCGGGAAA GACGGGCAAG AAGCCGGCGA AAAGCAAGGC GAGGAGCTGA
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Protein sequence | MDVVVVESPA KAKTINKYLG KDYKVLASFG HVRDLPAKDG SVRPEEDFAM SWEVDSPSAK RLADIAKAVK DADGLILATD PDREGEAISW HVLEVLRQKR ALKDKPVRRV VFNAITKKAI LDAMASPREV DASLVDAYLA RRALDYLVGF TLSPVLWRKL PGARSAGRVQ SVALRLVCDL EAEIERFVRE DYWQIAALLD TPRGDSFEAR LTTLDGKRLQ KLDIKSQEEA DSIKALLDGA AYRVLSVEAK PTRRNPGPPF TTSTLQQAAS SRLSFSASRT MQVAQRLYEG VEIGGETTGL ITYMRTDGVQ MAPEAIEAAR SAVSNTFGPR YLPEKPRHYS SKAKNAQEAH EAIRPTDFSR TPDEVRKYLD SDQARLYEMI WKRAIASQME AAEIERTTVE IEASGAGRAA GLRAVGSVVR FDGFLAAYAE VKDEDSQDEE DRRLPEINSG EALKRNSVNV TKHTTEPPPR YSEASLIKKL EELGIGRPST YAAILKTLDD RGYVSNERRK LVPQAKGRIV TAFLENFFRR YVEYDFTADL EEKLDEISDG KLSWKQVLRD FWKDFSAAVG DIKELRVTDV LDALNEELAP LVFPTREDGG DPRICPKCGA GKLSLKLGRY GAFVGCSNYP ECDYTRQLGE NPAENGEAEA GLNGNKVLGT DPFTGEEITL RSGRFGPYVQ RGEGKDAKRA GLPKGWTPED LDHEKAIALL SLPRDVGKHP ETGKMISAGI GRYGPFLLHD GTYANLETVE DVFSVGLNRA VSLLAEKQAK TNGARAKPAA LKELGEHPDG GVITVRDGRF GPYVNVGKVN ATLPKGKDPM SLTREEALEL LAAKAGKTGK KPAKSKARS
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