| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1353 |
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| Symbol | |
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| ID | 4181587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 1443793 |
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| End bp | 1446090 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638067242 |
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| Product | ribonuclease R |
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| Protein accession | YP_673914 |
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| Protein GI | 110633706 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.25106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGCGCA AGAACTCGAA AGCGGCAGGA GGGGAAGGTG CTTCCGCCAA TCCTCACCTG
CCTTCGCGCG AAGAGATCCT GCGCTTCGTC AGCGAAAATC CCGACCAGGC CGGAAAGCGC
GAGATCGCCA AGGCATTTTC GCTGAAGGGC GGCGACCGCA TCTGGCTAAA GGAGATGCTG
AGGGACATGC AAAATGACGG GCTTCTGAAA CAGAAGCGCC GTCGGCTCTC CCGGCCGGGC
TCCCTTCCCC CGATGGTCGT CCTCGACATT TTCTCGCGGG ATGCGGAAGG AGGGCTCCTG
GCGCGGCCGG CTGAACTGGA GGATGAGGAC GGTCCCATCC CGCTCGTTTC CATCCGCCCG
CAGCGGGGCG GCCGCTCCCC CGCAGCCGGC GTGGGCGACC GTGTGCTCGC CCGCGTGTTT
GCGAGCAAGG AGGAAGGCGG CCCGGCCTAT ACCGGCCGGG TGGTCAAGCT TTTCGAAAAG
CGCCGGCGGG CAGTGCTCGG GGTCTTCCGT GAAATGCCTG ATGGTACCCT CCGCATAGAG
CCGGTGGAGC GCCGCCAGCC CGAGCTGGTC GTGGATGAGG CTTCCCGCAA GGGCGCGAAA
AGTGGCGATC TCGTAGAGGT GGAGCCGCTA TCGCAAGGGC GCTACGGCCT GCCGCGCGCG
AGGGTGCTGG AGGTGGTGGG GTCAATCACG ACGGAAAAGG CGGTCTCGAT GATCGCCATC
CATGCCCACG AGATCCCCCA CATTTTTCCG GAAAGCGTGG TGAAAGAGGC CGAAAGCGTC
AAGCCGGCCA CGCTTGAAGG ACGTGAGGAT TGGCGCAAGC TGCCGCTTGT GACCATCGAT
CCGGCCGACG CCAAGGACCA TGACGATGCG GTCTATGCCG AGGCCGACAC GGATGAGAAG
AATCCGGGCG GCGTGGTGGT AACCGTCGCG ATCGCCGACG TTGCCTGCTA TGTGCGGCCC
GACTCCGCGC TCGACCGCGA GGCGCTTAAC AGGGGAAATT CGGTTTATTT CCCCGACCGC
GTCGTGCCGA TGCTGCCCGA GCGCATATCG AACGACCTGT GCTCGCTGCG CGAAGGGGAA
GCCAGGCCCG CGCTTGCCGT GCGCATGCGC TTTACCTCGG GCGGCCGCAA GATCGGGCAC
TCTTTTCATC GTGTCATGAT GCGCTCCGCG GCGCGCCTTT CCTACGAACA GGCCCAGGCG
GCGATCGACG GACGGCCGGA TGACAAGACA GGGCCGCTGC TTGAACCGGT GCTTCGCCCG
CTCTGGAATG CCTATTCGGT GCTCAAGCGC GGCAGGGAAG CGCGCGAGCC GCTGGAACTG
GACCTGCCTG AACGGAAAAT CATCCTGAAG CCCGATGGCA CGGTGGATCG CGTGGTGGTG
CCGCCGCGCC TCGATGCGCA CAAGCTCATC GAAGAGTTCA TGATCCAGGC GAATGTGGCG
GCGGCTGAAA CACTGGAATC GGTCCGCCAG CCGCTCGTCT ACCGCGTTCA CGACGCCCCT
TCCCTTGCAA AGCAGGAATC GCTGCGCGAG TTCCTTGGCT CCCTGGAAAT CTCGCTGGCG
CATGGAGCGG CGTTGAGGCC GGCGCAGTTC AACCGCATCC TCGCGCATGT GGCGGGCACT
GAGCAGGAGC AGCTCGTCAA CGAGGTGGTG CTGCGCTCGC AAAGCCAGGC GATCTATGCC
CGCGAGAATA TCGGCCATTT CGGGCTCAAC CTGCGCCGCT ATGCGCATTT CACCTCGCCG
ATCCGCCGTT ACGCGGACCT CATCGTGCAT CGGGCTTTGA TCACGGCGAT GAATTTCGGG
CCGGACGGCT TGAGGGAGGC GGACGAGGAG CGGCTGGAGG AAGTTTCCGC TCTCATCTCG
GCGACCGAAC GACGCGCCAT GGCAGCCGAG CGGGAGACGG TGGACCGCCT TATCGCCGAG
CATCTGGCGG GCCGCATCAA CGAGGAATTT TCCGCGCGGA TTTCGGGCGT CACCAAGGCC
GGGCTCTTCG TGCTCCTGCC TCAATACGGC GCGGACGGCT TCGTTCCCGT TTCGTCGCTG
GGGGACGACT ACTATATCTT TGACGAGGTG CGCCATGCGC TCGTCGGGCA GCGCAGTGGG
TGCGGCTATC AGCTCGGCGA CAGCGTGGAT GTTCGTCTGC TAGAAGTAGC ACCGCTTGCG
GGTGCCATGC GCTTTGAAGT CCTGACCAGC CCCACCCGCC TGCCCGGTTC CTCCAAATCT
TTCCATAAGG CGAGACGCGG ATCGGCCCGG AACCAGAAAC GCCCAAGCCG CTCCACGGTT
AGGGGCAGGA GACGATGA
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| Protein sequence | MARKNSKAAG GEGASANPHL PSREEILRFV SENPDQAGKR EIAKAFSLKG GDRIWLKEML
RDMQNDGLLK QKRRRLSRPG SLPPMVVLDI FSRDAEGGLL ARPAELEDED GPIPLVSIRP
QRGGRSPAAG VGDRVLARVF ASKEEGGPAY TGRVVKLFEK RRRAVLGVFR EMPDGTLRIE
PVERRQPELV VDEASRKGAK SGDLVEVEPL SQGRYGLPRA RVLEVVGSIT TEKAVSMIAI
HAHEIPHIFP ESVVKEAESV KPATLEGRED WRKLPLVTID PADAKDHDDA VYAEADTDEK
NPGGVVVTVA IADVACYVRP DSALDREALN RGNSVYFPDR VVPMLPERIS NDLCSLREGE
ARPALAVRMR FTSGGRKIGH SFHRVMMRSA ARLSYEQAQA AIDGRPDDKT GPLLEPVLRP
LWNAYSVLKR GREAREPLEL DLPERKIILK PDGTVDRVVV PPRLDAHKLI EEFMIQANVA
AAETLESVRQ PLVYRVHDAP SLAKQESLRE FLGSLEISLA HGAALRPAQF NRILAHVAGT
EQEQLVNEVV LRSQSQAIYA RENIGHFGLN LRRYAHFTSP IRRYADLIVH RALITAMNFG
PDGLREADEE RLEEVSALIS ATERRAMAAE RETVDRLIAE HLAGRINEEF SARISGVTKA
GLFVLLPQYG ADGFVPVSSL GDDYYIFDEV RHALVGQRSG CGYQLGDSVD VRLLEVAPLA
GAMRFEVLTS PTRLPGSSKS FHKARRGSAR NQKRPSRSTV RGRRR
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