| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1244 |
|---|
| Symbol | |
|---|
| ID | 4180132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1340467 |
|---|
| End bp | 1340988 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638067130 |
|---|
| Product | blue (type1) copper domain-containing protein |
|---|
| Protein accession | YP_673805 |
|---|
| Protein GI | 110633597 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3794] Plastocyanin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0177218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTGA CGCGCAGGCG CGTGCTGGAG GTTGGCGGGG GTATCCTCGC CGCCCTCCTG
GCCAGGCCAG CGGCGGCCTG GAGCGCTTCG GTCGAGATCG CCATGCAGGG GAGGCCCGAC
GGCTCGCATG TCTGGTTCGA TCCCATCGGC CTGCACATCG AGCCCGGCCA GACGGTACGC
TGGATCAATC GCGACCGGGG CAATTCACAT ACGGTCACGT CCTACCACCC GGAAATATTC
GATCGCCCCC GGCGCATCCC AGCCAAAGCC AAGGCATGGG ATTCGGGTTA TCTTCTGCCG
GAGGAGACTT TTTCCGTCCG TTTCGACGAA GAAGGCGTCT ACGACTATTA TTGCGTTCCG
CACGAGCATG CAGGCATGGT GGGCCGGATC GTGGTCGGAA AGCCGCCTGC CGTGGAAGCA
GCTGCGGAAA CCGCGGGTTT GACGCCTTTG CCGGAAGCGG CGCTAAATGG CTTTCCGCAG
GTCGAGGAGA TCATCGACAA CGGCATTGTG CGGCGGGAGT GA
|
|---|
| Protein sequence | MILTRRRVLE VGGGILAALL ARPAAAWSAS VEIAMQGRPD GSHVWFDPIG LHIEPGQTVR
WINRDRGNSH TVTSYHPEIF DRPRRIPAKA KAWDSGYLLP EETFSVRFDE EGVYDYYCVP
HEHAGMVGRI VVGKPPAVEA AAETAGLTPL PEAALNGFPQ VEEIIDNGIV RRE
|
|---|
| |