Gene Meso_1170 details

Gene Information

• Locus tag: Meso_1170
• Symbol: clpX
• ID: 4179629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 1278724
• End bp: 1279998
• Gene Length: 1275 bp
• Protein Length: 424 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 638067055
• Product: ATP-dependent protease ATP-binding subunit ClpX
• Protein accession: YP_673731
• Protein GI: 110633523
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1219] ATP-dependent protease Clp, ATPase subunit
• TIGRFAM ID: [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX)

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.170067
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGA TCAGCAACAG CGGCGGTGAT TCCAAGAACA CGCTGTACTG CTCGTTCTGC 
GGCAAGAGCC AGCATGAGGT CCGTAAGCTG ATCGCCGGCC CGACCGTCTT CATCTGCGAT 
GAATGCGTCG AGCTGTGCAT GGACATCATC CGCGAGGAGA ACAAGTCCTC GATGGTGAAG 
TCGCGCGAGG GTGTTCCCAC CCCGCAGGAG ATCATGGAGG TTCTGGACGA TTACGTGATC 
GGCCAGACCT ACGCCAAGCG CGTGCTCTCG GTAGCCGTTC ACAACCACTA CAAGCGGCTT 
GCCCACGCGG GCAAGAACGC GGATGTGGAG CTGTCGAAGT CCAACATCCT GCTGATCGGC 
CCGACGGGGT GCGGAAAGAC GCTGCTCGCC CAGACGCTGG CCCGCATTAT CGACGTTCCC 
TTCACGATGG CCGACGCCAC TACGTTGACC GAGGCAGGCT ATGTCGGCGA GGATGTCGAG 
AACATCATCC TGAAGCTGTT GCAGTCGGCG GATTATAATG TCGAGCGCGC GCAGCGCGGC 
ATCGTCTATA TCGACGAGAT CGACAAAATA TCCCGCAAGT CGGACAACCC CTCGATCACC 
CGCGACGTGT CGGGCGAGGG GGTGCAGCAG GCGCTCCTGA AGATCATGGA AGGGACGGTT 
GCCTCCGTGC CTCCCCAGGG CGGTCGCAAG CATCCGCAGC AGGAATTCCT CCAGGTGGAT 
ACCTCGTCGA TCCTGTTCAT CTGCGGCGGC GCCTTTGCAG GGCTGGAGAA GATCATTTCC 
GATCGCGGCA AGAAAACCTC CATCGGCTTC GGCGCAAGCG TATCCTCTCC GGAGGACCGC 
CGCGCGGGCG AGCTCCTGCG CCAGGTGGAG CCGGAAGACC TGTTGAAGTT CGGTCTGATC 
CCTGAATTTG TCGGGCGCCT GCCCATCCTT GCGACATTGG AGGATCTGGA CGAGGAAGCG 
CTCGTGCAGA TCCTCACCGA GCCCAAGAAC GCGCTGGTGA AACAGTATCA GCGCCTGTTC 
GAGATGGAGA ATGTGGAACT TACCTTCCAT GAAAACGCGC TGCGGGCGAT TGCCCGCAAG 
GCGATCGAGC GCAAGACGGG CGCTCGGGGC CTGCGTTCGA TCATGGAGGC GATCCTGCTC 
GACACCATGT TCGAGCTACC GGCGCTGGAA GGCGTTCAGG AGGTTGTTAT CTCCGAAGAT 
GTGGTCGCCG GCAGTGCCAG GCCCCTCTAC ATCTACGCCG AACGCGAAAA GGAAAAGGGT 
AGCGTCAGCG CGTGA 

 

Protein sequence

MSKISNSGGD SKNTLYCSFC GKSQHEVRKL IAGPTVFICD ECVELCMDII REENKSSMVK 
SREGVPTPQE IMEVLDDYVI GQTYAKRVLS VAVHNHYKRL AHAGKNADVE LSKSNILLIG 
PTGCGKTLLA QTLARIIDVP FTMADATTLT EAGYVGEDVE NIILKLLQSA DYNVERAQRG 
IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKIMEGTV ASVPPQGGRK HPQQEFLQVD 
TSSILFICGG AFAGLEKIIS DRGKKTSIGF GASVSSPEDR RAGELLRQVE PEDLLKFGLI 
PEFVGRLPIL ATLEDLDEEA LVQILTEPKN ALVKQYQRLF EMENVELTFH ENALRAIARK 
AIERKTGARG LRSIMEAILL DTMFELPALE GVQEVVISED VVAGSARPLY IYAEREKEKG 
SVSA