Gene Meso_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1139 
SymbolnusB 
ID4182547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand+ 
Start bp1245888 
End bp1246391 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content60% 
IMG OID638067023 
Producttranscription antitermination protein NusB 
Protein accessionYP_673700 
Protein GI110633492 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCACCC CCTCTAAAAG CCCTGCCGAA AACTTCCGCC CCGCCAACAA GCGCGGCGCC 
GCACGACTTG CTGCGGTGCA GGCGCTTTAT CAAATGGATG TTGCGGGCAC CGGTCTCCTC 
GAGACCACAG CCGAATATGA GGCTTTCCGG CTCGGCAAGG AGATCGACGG TGATCTCTAC 
CGGGAAGCAG ACGCGCAATG GTTCCGCGCG ATCCTGTCCG GCGTCATCGA GAATCAGACC 
TTTATCGATC CGGTCATTCG CCAGTCGCTG ACGGAGGATT GGCCGCTCTC ACGCCTCGAT 
TCGACGCTGC GTGCGATCCT GCGGGCCGGC GTCTATGAAC TTTCAAAGCG CTCCGACGTG 
CCTGTCCCCG TCGTTGTCTC TGAATATATC GATATAGCCA AGGCATTCTA CGGCGAGGAG 
GAAGAGCCTA AGCTGGTGAA TGCCGTTCTC GACCGTGTGG CACGTCGGAT GCGTGGCGAG 
GGCAAGGGCA AGGATCCTTC GTGA
 
Protein sequence
MTTPSKSPAE NFRPANKRGA ARLAAVQALY QMDVAGTGLL ETTAEYEAFR LGKEIDGDLY 
READAQWFRA ILSGVIENQT FIDPVIRQSL TEDWPLSRLD STLRAILRAG VYELSKRSDV 
PVPVVVSEYI DIAKAFYGEE EEPKLVNAVL DRVARRMRGE GKGKDPS