Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1116 |
Symbol | |
ID | 4179810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 1219738 |
End bp | 1220541 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638067000 |
Product | ABC transporter related |
Protein accession | YP_673677 |
Protein GI | 110633469 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.888431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGCTG AAAATCTCAC CGCTGCCGAG GGCATCCAGT TAGACCCTTC CAAGCTCAAG GTTTCGGACA CGGAGGTCGC GATCGAGATT GTCGGAATGC ACAAGTGGTA CGGCGACTTT CACGTGCTTC GCGACATAAA TCTCAAAGTG ATGCGGGGCG AACGTATCGT GGTCTGCGGA CCGTCCGGTT CAGGCAAATC AACGATGATC CGCTGCATCA ACAGGCTCGA GGACCATCAG AAGGGCAAGA TTGTCGTCGA TGGCATCGAA CTCACCAATG ATTTGAAGAA GATCGACGAG GTGCGCCGCG AGGTGGGCAT GGTTTTTCAG CACTTCAACC TGTTCCCGCA TCTGACGATC CTCGAAAACT GCACGCTGGC GCCGATCTGG GTGCGCAAAA TTCCGCGCAG GGAGGCGGAA GAGGCCGCCA TGCACTATCT GACGCGCGTG CGCATTCCAG AGCAGGCGAA CAAATATCCA GGACAGCTTT CAGGAGGGCA GCAGCAGCGT GTCGCGATTG CGCGCGCGCT TTGCATGAAC CCGCGCATCA TGCTCTTCGA CGAGCCCACC TCTGCCCTCG ACCCCGAAAT GATCAAGGAG GTGCTCGACA CGATGGTGGA CCTGGCGCAG GAAGGCATGA CCATGATCTG CGTCACGCAT GAGATGGGCT TTGCTCGCCA GGTGGCAAAC CGCGTGATTT TCATGGATCA GGGGCAAATC GTCGAACAGA ATACCCCGGA ACAGTTTTTC GAACACCCTC AACACGAGCG CACGAAACTG TTCCTCTCAC AAATCCTTCA CTGA
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Protein sequence | MSAENLTAAE GIQLDPSKLK VSDTEVAIEI VGMHKWYGDF HVLRDINLKV MRGERIVVCG PSGSGKSTMI RCINRLEDHQ KGKIVVDGIE LTNDLKKIDE VRREVGMVFQ HFNLFPHLTI LENCTLAPIW VRKIPRREAE EAAMHYLTRV RIPEQANKYP GQLSGGQQQR VAIARALCMN PRIMLFDEPT SALDPEMIKE VLDTMVDLAQ EGMTMICVTH EMGFARQVAN RVIFMDQGQI VEQNTPEQFF EHPQHERTKL FLSQILH
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