Gene Meso_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1116 
Symbol 
ID4179810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1219738 
End bp1220541 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content56% 
IMG OID638067000 
ProductABC transporter related 
Protein accessionYP_673677 
Protein GI110633469 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.888431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGCTG AAAATCTCAC CGCTGCCGAG GGCATCCAGT TAGACCCTTC CAAGCTCAAG 
GTTTCGGACA CGGAGGTCGC GATCGAGATT GTCGGAATGC ACAAGTGGTA CGGCGACTTT
CACGTGCTTC GCGACATAAA TCTCAAAGTG ATGCGGGGCG AACGTATCGT GGTCTGCGGA
CCGTCCGGTT CAGGCAAATC AACGATGATC CGCTGCATCA ACAGGCTCGA GGACCATCAG
AAGGGCAAGA TTGTCGTCGA TGGCATCGAA CTCACCAATG ATTTGAAGAA GATCGACGAG
GTGCGCCGCG AGGTGGGCAT GGTTTTTCAG CACTTCAACC TGTTCCCGCA TCTGACGATC
CTCGAAAACT GCACGCTGGC GCCGATCTGG GTGCGCAAAA TTCCGCGCAG GGAGGCGGAA
GAGGCCGCCA TGCACTATCT GACGCGCGTG CGCATTCCAG AGCAGGCGAA CAAATATCCA
GGACAGCTTT CAGGAGGGCA GCAGCAGCGT GTCGCGATTG CGCGCGCGCT TTGCATGAAC
CCGCGCATCA TGCTCTTCGA CGAGCCCACC TCTGCCCTCG ACCCCGAAAT GATCAAGGAG
GTGCTCGACA CGATGGTGGA CCTGGCGCAG GAAGGCATGA CCATGATCTG CGTCACGCAT
GAGATGGGCT TTGCTCGCCA GGTGGCAAAC CGCGTGATTT TCATGGATCA GGGGCAAATC
GTCGAACAGA ATACCCCGGA ACAGTTTTTC GAACACCCTC AACACGAGCG CACGAAACTG
TTCCTCTCAC AAATCCTTCA CTGA
 
Protein sequence
MSAENLTAAE GIQLDPSKLK VSDTEVAIEI VGMHKWYGDF HVLRDINLKV MRGERIVVCG 
PSGSGKSTMI RCINRLEDHQ KGKIVVDGIE LTNDLKKIDE VRREVGMVFQ HFNLFPHLTI
LENCTLAPIW VRKIPRREAE EAAMHYLTRV RIPEQANKYP GQLSGGQQQR VAIARALCMN
PRIMLFDEPT SALDPEMIKE VLDTMVDLAQ EGMTMICVTH EMGFARQVAN RVIFMDQGQI
VEQNTPEQFF EHPQHERTKL FLSQILH