Gene Meso_1091 details

Gene Information

• Locus tag: Meso_1091
• ID: 4181251
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 1195884
• End bp: 1197809
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 638066974
• Product: TRAP transporter, 4TM/12TM fusion protein
• Protein accession: YP_673653
• Protein GI: 110633445
• COG category: [R] General function prediction only
• COG ID: [COG4666] TRAP-type uncharacterized transport system, fused permease components
• TIGRFAM ID: [TIGR02123] TRAP transporter, 4TM/12TM fusion protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.768429
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAGCC AAGCTAAACC GGTCGTCCCT CCCATATTGC TCGTCCTCAC GACCCTTACC 
GTGCTCTGGC ACGTCGTGAC GATAGCGCAG TTGCCCACTT GGTTCGGCAT CTTCATTCCT 
CAGGCGTCGA TCCGGGCCAC GAGCCTCGTG CTTGCCGCTG TGCTGATCCT GCTCACCTCC 
CATGCCGCGA GCGGCCATGA GGGCGAACCG CTTAAGGACG GCGTCCGCTT CCGCTGGCTC 
GACCTTCTGG TGTTCGCGCC GCTTGCCGCA GGCTGCAGCC TTGTCATTTT CAACTACGAC 
AAGGTGCTGG ACTACGGCTT CTTCGGTGCG CTCGACACCA CCGGCGTCAT TCTGGCGCTC 
TGCGTCGCCG TTCCCCTCCT GGAACTCGTG CGCCGCAAGA CTGGGATCGT ATTGCCGATC 
ATCATCCTGA GCTTCGTCGC CATTGCGATG TTCCAGGCCT ATCTGCCCGG AGTCCTGCAC 
GGCCGAGGCT ATTCGCTCGA CCGGCTCCGT TACTCTTCCT ATGTCGGCGA ATCCGGGATA 
TTCGGCGCGC CGCTCGGCAT CGCCGTCAAT ATCGTAATGG TCTACTTGCT GTTCGGCGCT 
CTGATGGAGA GGGCAGGGGC CAGCCGCTGG TTTATGGATC TCGCGCTCTC ACTCACCGGC 
CGGTCGAGCG GCGGTCCGGC CAAGGCGTCC GTCGTCGCTT CCGCTATGTT CGGCTCCATC 
TCTGGCTCGC CCTCGGGCAA CGCCGCCACC ACTGGCGTGT TCACCATTCC GATGATGCGC 
GAGGTGGGCT ATAAGCCGAG CTTCGCCGCT GCCGTTGAAG CGGTGGCATC GACCGGGGGC 
ATGATCCTGC CGCCGGTGAT GGGGGCCATT GCCTTCCTCA TGGCCGAATG GATCGGCCGC 
ACCTATCGCG AAGTCGTCAT CGCGGCGCTG ATCCCGGCGA TCCTCTACTT CATCGTGATC 
TTCGCGTCGG TGCATTTCGA GGCAAAGCGC TCGGGTATCC GTGCTATGGC GCGCACCGAC 
CTCCCTGCCT TCTGGAAGAC GCTGCGCAGC GGCTGGTACT ACGCGCTGCC CATGCTGGCG 
CTGATCTGGT TCCTGATCAT CGCCGCGTTG CCGCCGGGAA TGGCAGGGAT TTATTGCTGC 
GGCGTGGTTC TGCTCTGCTC GTTCCTGTCG CCCGATCGCT CGCGCTGGCT CCTGCCAAGG 
CCTCTGCTTC TCGCGATGAA AGACGCAGTG ATGCGCTGGC TCGTCATCGT CGTCATCACC 
GCTTCCGTCG GCATCATGAT TGGCGCGATG GAACTCTCGG GCGTCGGCCT CAACGTCTCG 
CGCTTCATCG TCGATATCGG CGGCGGCAAC CTTGTCGTCA CGCTGGTCCT CGTCGGGGCT 
GTCAGCCTCC TGATCGGCAT GGGACTCGAC GCGACCCCGG CCTACGTGAC GCTCGCCACG 
CTCATGGCCC CTGCGCTGAT TCAGATGGGC GTTCAGGACA TCGCAGCGCA CCTGTTCGTG 
GTCTATTGGG GCCTTGCCTC TTTCTTCACA CCGCCAACCT GCATCGCGAT TTTCGTTACC 
GCTCCGATGG CCGGCGCGAG CGTCTGGGCG GCGGGCTGGC AGGCCGTGCG CCTTGGCATC 
GCGGCCTTCC TTGTGCCGAT GAGCTTTGCG CTGAACCCCG CCCTGCTCAT GGAGGGGGCC 
GTCAGAGAGA TCATCCTCGC CACCGGCACC GCGCTGGTTG GTGCAGTCGC ACTTTCCGCG 
GGTCTTCGCG GCTTCGCATT ACAGCGGCTC AGCGGAGCTG AGCGCGCGCT GATCTCACTC 
GGCGGTGTTC TCCTGATTGC ACCGGGCATC GCGCCCGCCC TCATTGGGCT GGGCCTCGTC 
GTCGGAGTGG TGGTCTGGTC GACCTGGCTT CAATCCGTCC GTCCAGTGCG GGAGGGGTCG 
CCGTGA 

 

Protein sequence

MSSQAKPVVP PILLVLTTLT VLWHVVTIAQ LPTWFGIFIP QASIRATSLV LAAVLILLTS 
HAASGHEGEP LKDGVRFRWL DLLVFAPLAA GCSLVIFNYD KVLDYGFFGA LDTTGVILAL 
CVAVPLLELV RRKTGIVLPI IILSFVAIAM FQAYLPGVLH GRGYSLDRLR YSSYVGESGI 
FGAPLGIAVN IVMVYLLFGA LMERAGASRW FMDLALSLTG RSSGGPAKAS VVASAMFGSI 
SGSPSGNAAT TGVFTIPMMR EVGYKPSFAA AVEAVASTGG MILPPVMGAI AFLMAEWIGR 
TYREVVIAAL IPAILYFIVI FASVHFEAKR SGIRAMARTD LPAFWKTLRS GWYYALPMLA 
LIWFLIIAAL PPGMAGIYCC GVVLLCSFLS PDRSRWLLPR PLLLAMKDAV MRWLVIVVIT 
ASVGIMIGAM ELSGVGLNVS RFIVDIGGGN LVVTLVLVGA VSLLIGMGLD ATPAYVTLAT 
LMAPALIQMG VQDIAAHLFV VYWGLASFFT PPTCIAIFVT APMAGASVWA AGWQAVRLGI 
AAFLVPMSFA LNPALLMEGA VREIILATGT ALVGAVALSA GLRGFALQRL SGAERALISL 
GGVLLIAPGI APALIGLGLV VGVVVWSTWL QSVRPVREGS P