| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1090 |
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| Symbol | |
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| ID | 4181250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 1194820 |
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| End bp | 1195818 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638066973 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_673652 |
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| Protein GI | 110633444 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0945459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTTG CCACTATCAC CAGGCGCGCA GTGCTCGGCG GACTCGCCGC CGGAACTGCC
ACGCTTTGGC TGCCCGGCGT GAGCTTCAGC CAGGCCGCTT CCGTGCGAAT CGGCACTTCG
AGCGCGGGCT CGGTATTTTA CACCCTCGCC GTCGGGCTCG GCGAGATGAT CCGCGAAAGC
TCGGGGATCA ATAGCACCAT CGAGCCGGTG GGCGGCTCTG CCGCTAACGT CAACGGCATC
GCCAATGACA ATGTCGATCT GGCGATCTCC AACTCCTTCG CTTCCTATTC GGGCTATAAC
GGCGAATTCG GCTTTCCCGC CCCGATCGAT TTGCGTCTCG TCATCCAGGG CCAGGCGAGC
AATCGCTGGC TGTTCGTACG CGAAGGCTCC GGCATCTCGT CGCCTGCGGA CCTCGTGGGC
AAGACCGTGA TCGGCAAGCG CCGCTCGCTG CCGGAGCTCG AACTCGTCAC GCACGCCTTT
CTTCACCCGT CGGACGTCAA CATCGTCGGC ACGGTGGAAT CGAACGAAAC CATCGACGCG
ATCCGCGCCG GCAGCGTGGA CGCGATCATG ATGCCATTCA GCCGCCGCGC CGGCCAGATC
GAGGAACCGA TGCACGACGG CGTGATGACC GCGCTAAAAA TCTCGAAGGA AGACCGTGAC
GGCATCCTTG CCCGCCTGCC GAACGGCTTC TACGGCCTAG ACATTCCGGC CAACGACTTC
TCGAACCAGC CCGAGGAATT GCCGGCTGTC GCGCTGAACA CCTACCTGAT CAGTTCGCCT
GAACTCGACG AAGAAACCGT CTATCAGATC GCCAAGTCCG TGTTCGAGAA CATCGAAAAG
TTCCGCAGCT ATCATGCGAC GGGCGGGCAA TGGACCGTCG AGAATACGCT GATAGCTCCT
GCGCTGCCCT ATCACGATGG CGTTGTGCGT TACTTCAAGG AGATCGGCGT TTGGACTGAC
GAGATCCAGG CCAAGCAGGA CAAGCTCCTC ACCCGTTGA
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| Protein sequence | MTFATITRRA VLGGLAAGTA TLWLPGVSFS QAASVRIGTS SAGSVFYTLA VGLGEMIRES
SGINSTIEPV GGSAANVNGI ANDNVDLAIS NSFASYSGYN GEFGFPAPID LRLVIQGQAS
NRWLFVREGS GISSPADLVG KTVIGKRRSL PELELVTHAF LHPSDVNIVG TVESNETIDA
IRAGSVDAIM MPFSRRAGQI EEPMHDGVMT ALKISKEDRD GILARLPNGF YGLDIPANDF
SNQPEELPAV ALNTYLISSP ELDEETVYQI AKSVFENIEK FRSYHATGGQ WTVENTLIAP
ALPYHDGVVR YFKEIGVWTD EIQAKQDKLL TR
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