Gene Meso_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1085 
Symbol 
ID4181245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1190586 
End bp1191365 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content58% 
IMG OID638066967 
Productexodeoxyribonuclease III 
Protein accessionYP_673647 
Protein GI110633439 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.647883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG CCACCTTCAA CATCAACAAT ATCAACAAGC GGCTGCCAAA CCTTCTCGAA 
TGGCTTCATT TATCAAAGCC GGACGTGGTT TGCCTGCAGG AATTGAAAGC CACGGACGAC
GCCTTTCCGA AAAGCGCGAT AGAGAGCTTC GGCTATAGAG CGGTCTGGAA AGGCCAGAAA
TCCTGGAATG GCGTGGCGAT CCTATCGAGG GTAGGCGAGC CTGTTCTGAC CAGGACGCGT
CTTCCCGGAG ACGCCGCCGA CACGCAGGCC CGATATATCG AGGCGGCGGT AAGGGGGGTA
CTTATCGCTT CGATCTACGC GCCGAATGGC AATCCGCAGC CGGGACCGAA ATTCGACTAC
AAGCTGGCCT GGTTGGAACG CCTGAGAAAG CATGCGACCG CGCTCCGGAA AACCGGCGCT
CCGATTGTGC TGGCGGGCGA TTTTAACGTC GCCCCCACGG ATATCGATAT TTATCCCACC
AAGTCATGGG GTGATAACGC GCTCATTCAG CCGGAGAGCC GGGCAGCATT CAGGCGGCTT
CTCGGCCGAA GCTGGACGGA TGGCATCCGA CTCCTGCATC CGGAACAACG CATATACACG
TTCTGGGACT ACAAACGCCT GCGCTGGCAG CGCGATGCCG GGCTGCGGCT CGACCACCTG
CTGCTCAGCG AGAATTTACG CGGAGCTATC GTGAAAGCAG GTGTAGACCG CGATGTGAGA
GGCAGGGAAG GCGCGAGCGA TCATGCGCCC GCATGGATAG AGCTGAATTT GCGCCGGTGA
 
Protein sequence
MKIATFNINN INKRLPNLLE WLHLSKPDVV CLQELKATDD AFPKSAIESF GYRAVWKGQK 
SWNGVAILSR VGEPVLTRTR LPGDAADTQA RYIEAAVRGV LIASIYAPNG NPQPGPKFDY
KLAWLERLRK HATALRKTGA PIVLAGDFNV APTDIDIYPT KSWGDNALIQ PESRAAFRRL
LGRSWTDGIR LLHPEQRIYT FWDYKRLRWQ RDAGLRLDHL LLSENLRGAI VKAGVDRDVR
GREGASDHAP AWIELNLRR