Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1085 |
Symbol | |
ID | 4181245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1190586 |
End bp | 1191365 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638066967 |
Product | exodeoxyribonuclease III |
Protein accession | YP_673647 |
Protein GI | 110633439 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.647883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGATTG CCACCTTCAA CATCAACAAT ATCAACAAGC GGCTGCCAAA CCTTCTCGAA TGGCTTCATT TATCAAAGCC GGACGTGGTT TGCCTGCAGG AATTGAAAGC CACGGACGAC GCCTTTCCGA AAAGCGCGAT AGAGAGCTTC GGCTATAGAG CGGTCTGGAA AGGCCAGAAA TCCTGGAATG GCGTGGCGAT CCTATCGAGG GTAGGCGAGC CTGTTCTGAC CAGGACGCGT CTTCCCGGAG ACGCCGCCGA CACGCAGGCC CGATATATCG AGGCGGCGGT AAGGGGGGTA CTTATCGCTT CGATCTACGC GCCGAATGGC AATCCGCAGC CGGGACCGAA ATTCGACTAC AAGCTGGCCT GGTTGGAACG CCTGAGAAAG CATGCGACCG CGCTCCGGAA AACCGGCGCT CCGATTGTGC TGGCGGGCGA TTTTAACGTC GCCCCCACGG ATATCGATAT TTATCCCACC AAGTCATGGG GTGATAACGC GCTCATTCAG CCGGAGAGCC GGGCAGCATT CAGGCGGCTT CTCGGCCGAA GCTGGACGGA TGGCATCCGA CTCCTGCATC CGGAACAACG CATATACACG TTCTGGGACT ACAAACGCCT GCGCTGGCAG CGCGATGCCG GGCTGCGGCT CGACCACCTG CTGCTCAGCG AGAATTTACG CGGAGCTATC GTGAAAGCAG GTGTAGACCG CGATGTGAGA GGCAGGGAAG GCGCGAGCGA TCATGCGCCC GCATGGATAG AGCTGAATTT GCGCCGGTGA
|
Protein sequence | MKIATFNINN INKRLPNLLE WLHLSKPDVV CLQELKATDD AFPKSAIESF GYRAVWKGQK SWNGVAILSR VGEPVLTRTR LPGDAADTQA RYIEAAVRGV LIASIYAPNG NPQPGPKFDY KLAWLERLRK HATALRKTGA PIVLAGDFNV APTDIDIYPT KSWGDNALIQ PESRAAFRRL LGRSWTDGIR LLHPEQRIYT FWDYKRLRWQ RDAGLRLDHL LLSENLRGAI VKAGVDRDVR GREGASDHAP AWIELNLRR
|
| |