| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1041 |
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| Symbol | |
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| ID | 4180399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 1143464 |
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| End bp | 1144747 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638066921 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_673603 |
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| Protein GI | 110633395 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0901467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGAG CCGAGGCGGC AAAAGGGGGT ATTAAACCCT TCTCCTATTT CGAGCGCCTC
GTCGCTTGGC GCTATCTGCG CTCGCGCCGC AAGGAAACCG TCGTTTCCGT GATCGCGCTG
ATTTCATTTC TGGGCATCAT GCTCGGAGTC GCCACTCTTA TTGTGGTGAT GGCGGTGATG
AACGGCTTTC GCGGCGAACT CCTGACACGC ATTCTGGGCG TGAACGGCCA TATCATCGTG
CAGCCCGTCG ATTCACCATT GAGCGACTAT GATGCGGTCG CCGGACGCAT CGCCCAGGTG
CCAGGCGTGC GTGACGCAAT GCCGATCGTG GAGGGGCAGG TGCTTGCCTC CGGTCGCAGC
GGAGCCGGTA GCGGCGCGCT CGTCCGTGGT GTGCGTGCTG AAGACCTCAC CAAGATCGAT
CTGGTGGCAA AGAACATTCG TGTCGGCTCG CTGGTCGATT TTGCCGCGGG GCAGGGGGTC
GCAATCGGGT CTCGCATGGC GCAGAGCCTC GGACTGGCGG TGGGTGATTC CATCACCCTT
GTTGCGCCGG AAGGCGATGT GACGCCCTTT GGCACGACAC CCCGCGTGAA AAGCTATCCC
GTCACGGCTG TCTTCGAGAT CGGCATGTCG GAATATGATG CCTCCATCAT ATATATGCCG
CTGGAGGAGG CGCAGCTCTT CTTCAATGTC GAAGGCCTGG TACAGTTCAT CGAAGTATTC
GCTGATCATC CCGACAATGT CGGCACCTTG CGTCCACTGG TGGAGGAGGC GGCCATGCGC
CCGGTCTCCA TTAGCGACTG GCGCCAGCGA AATCAGGTGT TCTTCTCCGC CCTTCAGGTC
GAGCGGAACG TTATGTTCAT GATCCTGACC ATGATTGTGC TGGTGGCGGC GCTCAACATC
ATTTCCGGCA TGATCATGCT GGTGAAGGAC AAGAGCCACG ACATAGCCAT TCTGCGCACG
ATGGGAGCCA CCAGCGGCTC TATCATGCGC ATCTTCCTGA TGGCGGGTGC TTCGATCGGT
GTGGCGGGAA CCTTCGCCGG CCTTGTGCTC GGGTCGATGC TCTGCCTGAA CGTGGAATCC
ATCCGGGAGT TCTTCACCTG GTTATCAGGC ACGGTGATCT TCGATCCGGA AGTGTATTTC
CTGAGCCAGT TGCCCGCCGA TATGGAAAGT GGCGAAACCA TTTCCGTGGT CTTGATGGCC
CTCATCCTTT CCTTCCTTGC AACTCTGTTT CCGGCCTGGC GCGCTTCGCG CCTCGATCCC
GTGGACGCCT TGAGATACGA GTAG
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| Protein sequence | MSGAEAAKGG IKPFSYFERL VAWRYLRSRR KETVVSVIAL ISFLGIMLGV ATLIVVMAVM
NGFRGELLTR ILGVNGHIIV QPVDSPLSDY DAVAGRIAQV PGVRDAMPIV EGQVLASGRS
GAGSGALVRG VRAEDLTKID LVAKNIRVGS LVDFAAGQGV AIGSRMAQSL GLAVGDSITL
VAPEGDVTPF GTTPRVKSYP VTAVFEIGMS EYDASIIYMP LEEAQLFFNV EGLVQFIEVF
ADHPDNVGTL RPLVEEAAMR PVSISDWRQR NQVFFSALQV ERNVMFMILT MIVLVAALNI
ISGMIMLVKD KSHDIAILRT MGATSGSIMR IFLMAGASIG VAGTFAGLVL GSMLCLNVES
IREFFTWLSG TVIFDPEVYF LSQLPADMES GETISVVLMA LILSFLATLF PAWRASRLDP
VDALRYE
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