| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1016 |
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| Symbol | |
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| ID | 4180530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 1114461 |
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| End bp | 1117256 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638066896 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_673578 |
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| Protein GI | 110633370 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.539907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAA CTTTCTCCAC CCGCCATATC GGCCCGCGCA GCGACGAGAC CAAGGCGATG
CTCGCCTTTC TCGGTCTCCC CTCGCTCGAG ACGCTGATCA GCCAGGCGGT GCCGAAATCA
ATCCGCCTCG ACCGCCCTCT CAACCTCCCG GAAGCGGCGA GCGAGGCCGA AGCCCTGGCA
GAGCTGCAGG CTTATATGCG GGAGAATAAG GTTCTGAAGA GCTTTATCGG CGCCGGATAT
CATGGCTGCC ATGTCCCGCC GGTCATCCAG CGGAACCTGT TCGAGAACCC GGCCTGGTAC
ACGGCCTATA CGCCTTATCA GTCCGAGATA AGCCAGGGCC GCCTGGAAAT GCTCTTCCAC
TTCCAGACGC TGGTGACGGA GCTTACCGGC TTGCCCGTTG CCTCCGCCTC CCTTTTGGAT
GAGGCGTCGG CTGTCGCCGA GGCTGTCGGA ATCGCCTGGC GGCATCACAA GAGCAAGCGC
AACAGAATAG TGATCGCCGG CGCGCTCAAT CCGCAGACGC GCGATGTCGT GGAAACACGC
GCGGAGCCTC TCGGTATCGA GATTGCAACG AATATTGAGC TCGATGGCGA CACCTTTGCC
CTTATCGTTC CGTGGGGCGA CACCTACGGT GCCTACGAGG ATCACTCGGC CCTCATCGGC
GAGGCAAAAG CGAAGGACGC GATCGTCATC TTCGTGGCCG ATCCGCTCGG TCTTCTGCTC
AGCGACACGC CGGCCGCGCT TGGCGCGGAG ATTGCCGTCG GCCCGATGCA GCGCTTCGGC
GTTCCCATGG GCTTTGGCGG CCCGCATGCG GCTTATTGCG CGGTTTCCGA CCGGCTGACC
CGCCTGATGC CGGGCCGGCT CGTCGGCCAG TCGGTCGATG CCCATGGCCG CCCGGGCTAT
CGCCTGGCGC TACAGACGCG CGAGCAGCAC ATCCGCCGCG ACAAGGCCAC CTCAAATATC
TGCACCGCCC AGGCGTTGCT CGCCAATATG GCGGCGGCTT ATGCAATCTG GCACGGGCCT
GAGGGGCTGA AGGCCATCGC AACGCATGTG CATGGCCTTG CCGCGCGCCT CCATGCGGGT
CTCAAGGCGG CGGGCCTGGA GCTTGCCGGC GAGAAGATTT TCGACACGGT GACGGTCACC
GTTCCCGGCA AGGCCGCGGC GATTGCGGCT GAGGCCGAGA AAACCGGCAG CCTGCTGCGT
GTCATTGATG CGGACCGTGT CGGGATCACC TTCGACGAGA TATCGACCGA GGCCGATCTG
GAATCGATCG CCAAACTCTT CGGCATCACC GTGCCCGCCG CAGCCCCGGC AATCGCGCCG
TCGCAGCCTC GCGGCGAGCA CTTCCTCACG CAGCCTGTCT TCCACGAGCA CCGCTCGGAA
ACGGAGATGA TGCGCTTCCT GCGGCGGCTC TCCGACAAGG ATCTGGCGCT TGACCGGGCG
ATGATCCCGC TCGGCTCCTG CACCATGAAG CTCAATGCGG CGGCCGAAAT GATGCCGGTG
AGCTGGCCGG AGGTAAACGG CCTCCACCCC TTCGCGCCGG ATGCCCATAC GGTGGGCTAT
CGCCGCATGG TCGGCGAGCT TGAAGGCTGG CTTGCCGAGA TCACCGGCTT TGATGCCGTG
TCGCTGCAGC CCAATGCCGG CAGCCAGGGC GAATATGCCG GGCTTCTCGC TATCCGCCGC
TATTTCCGCG AGCGCGGCGA GGACCATCGC GATGTCTGCC TTATCCCCTC CTCGGCCCAT
GGCACCAATC CGGCGTCCGC TGCGATGGCC GGCATGCGCG TGGTGGTCGT GCGCTGCCTT
GAGCAAGGCG ATATCGATCC TGAGGACCTG AAGGCCAAGG CCGAGGAGCA CTCGAGCCGC
CTTGCCGCCC TTATGATCAC CTATCCCTCC ACGCATGGGG TGTTCGAGGA AGGCGTGCGC
GACATGTGCG CCCTCATCCA TGAGCATGGC GGACAGGTCT ATCTCGACGG CGCCAACCTC
AATGCGCTCG TTGGCCTCGC GCGTCCGGGC GATCTCGGCG CCGATGTATG CCACATGAAC
CTGCACAAGA CCTTCTGCAT TCCGCATGGC GGCGGCGGGC CGGGCATCGG CCCGATTGGC
GTGAAGGCGC ACCTGCAGCC CTTCCTGCCC GGCCACGTGG AGTTGGGCTC GGCCCACGCC
GTGGCGGCTG CCCCCTTCGG CAGTGCGTCC ATTCTGCCCA TCACCTGGAT GTATATCCGC
ATGATGGGCG CGGCGGGGCT GAAGCGCGCG ACGGAAATGG CGATCCTTAA CGCCAACTAC
ATCGCCGGCA GGCTTGAGGC GTACTATCCG GTACTCTACC GGGGCCGCAA CGGCCGGGTC
GCGCACGAAT GCATTCTCGA CACCCGCGTC TTCAAGGAAC GGGCAGGCAT AGGCGTCGAG
GACATCGCCA AGCGCCTCAT CGACTATGGC TTCCATGCGC CGACCATGTC CTGGCCGGTG
GCCGGCACGC TCATGGTCGA GCCGACCGAG TCGGAGCCCA AGAGCGAACT CGACCGCTTT
TGCGACGCGA TGATCTCCAT TGCGGGAGAA GCGGGACGCG TGGAAAAAGG CGAGTGGCCG
AAAGACGACA ATCCGCTTGT CAACGCGCCC CACACCGCCG CGGAGCTGAT GGCCGATACC
TGGTCGCATC CCTATTCCCG CGCGGAAGCG GCCTTCCCGT CGGGAAGCAT GGATTGGGCG
GCGAAATACT GGCCGCCCGT CTCCCGCGTC GACAATGTGG CGGGCGACCG CAACCTTGTC
TGCGCCTGCC CGCCTATCGA GGCGCTCGCA AGCTGA
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| Protein sequence | MTATFSTRHI GPRSDETKAM LAFLGLPSLE TLISQAVPKS IRLDRPLNLP EAASEAEALA
ELQAYMRENK VLKSFIGAGY HGCHVPPVIQ RNLFENPAWY TAYTPYQSEI SQGRLEMLFH
FQTLVTELTG LPVASASLLD EASAVAEAVG IAWRHHKSKR NRIVIAGALN PQTRDVVETR
AEPLGIEIAT NIELDGDTFA LIVPWGDTYG AYEDHSALIG EAKAKDAIVI FVADPLGLLL
SDTPAALGAE IAVGPMQRFG VPMGFGGPHA AYCAVSDRLT RLMPGRLVGQ SVDAHGRPGY
RLALQTREQH IRRDKATSNI CTAQALLANM AAAYAIWHGP EGLKAIATHV HGLAARLHAG
LKAAGLELAG EKIFDTVTVT VPGKAAAIAA EAEKTGSLLR VIDADRVGIT FDEISTEADL
ESIAKLFGIT VPAAAPAIAP SQPRGEHFLT QPVFHEHRSE TEMMRFLRRL SDKDLALDRA
MIPLGSCTMK LNAAAEMMPV SWPEVNGLHP FAPDAHTVGY RRMVGELEGW LAEITGFDAV
SLQPNAGSQG EYAGLLAIRR YFRERGEDHR DVCLIPSSAH GTNPASAAMA GMRVVVVRCL
EQGDIDPEDL KAKAEEHSSR LAALMITYPS THGVFEEGVR DMCALIHEHG GQVYLDGANL
NALVGLARPG DLGADVCHMN LHKTFCIPHG GGGPGIGPIG VKAHLQPFLP GHVELGSAHA
VAAAPFGSAS ILPITWMYIR MMGAAGLKRA TEMAILNANY IAGRLEAYYP VLYRGRNGRV
AHECILDTRV FKERAGIGVE DIAKRLIDYG FHAPTMSWPV AGTLMVEPTE SEPKSELDRF
CDAMISIAGE AGRVEKGEWP KDDNPLVNAP HTAAELMADT WSHPYSRAEA AFPSGSMDWA
AKYWPPVSRV DNVAGDRNLV CACPPIEALA S
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