Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1002 |
Symbol | |
ID | 4181687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1100226 |
End bp | 1101206 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638066882 |
Product | patatin |
Protein accession | YP_673564 |
Protein GI | 110633356 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGATT GGGGACCGCT CCGCGGAAAA TCCGAGGGCA GTGACAACAA CGCCATGAAG CCTCCGGCTA AGCAGCTTCA CGCCGCCGAC CAAGGACCAG CTATCGCACT GGCGCTCGGC GGAGGCGCCG CGCGCGGCTG GGCCCATATC GGGGTGCTGC GCGCACTGGA CGAGGCCGGT ATTCGAATTT CCATGATCGC GGGCACCTCC ATCGGCGCGC TTGTGGGCGG CTGTTATCTT GCCGGTAAGC TGGATGCGCT CGAAGAGTTT GCGCGTTCGC TGACCCGCCG CCGCATCCTG GGTCTGCTCG ATCTCAATTT CGGCGGCAGC GGGCTCCTGG GCGGCATGAA GCTCACTCAG AGAATGCAGG AGCACCTCAA CGGGCTCACC TTCGAGGATT TGCCGAAACC GTTCGTCTGC GTCGCGGCGG AAATCCGCAC CGGGCATGAA ATCTGGATTT CCAGTGGTTC CCTTATCACG GCCATGCGGG CCTCCTACGC CCTGCCGGGC GTTTTCGAGC CGGTGGTCTG CAACGGCCGC GTGCTCATCG ACGGCGCGCT TGTCAATCCC GTTCCCGTAA CAGTCTGCCG GGCGCACGAG CAGCCGCTCG TCGTGGCCGT CAATCTCCAT TACGACGTCT TTGGCCGGGC GGCAGTCATC CGGCACAGCG CCGACCTGCC GGAAAAGGAA GGCAAGCCCC TGGACGGCGA AAAGGCGCCT CTGCTTGTCG ACAAAGGTCC ACGGCGGCAC GAAATGCGGC TTGGCATTAC CGGAGTGATG GTCGAGGCCT TCAACATCAT CCAGGACCGC ATTTCCCGCG CGCGTCTGGC GGGCGATCCG CCGGACCTGT CGCTCCAGCC GAAGCTTGGC CACATCGGGC TGACGGAGTT CTACCGTGCG GGCGAAGCGA TCGATGTCGG CTATGAGACG ACCAAGTCCC AGCTTGCCGA TCTGGAACGC ATGCTGAGCG TCTTGACCTA G
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Protein sequence | MLDWGPLRGK SEGSDNNAMK PPAKQLHAAD QGPAIALALG GGAARGWAHI GVLRALDEAG IRISMIAGTS IGALVGGCYL AGKLDALEEF ARSLTRRRIL GLLDLNFGGS GLLGGMKLTQ RMQEHLNGLT FEDLPKPFVC VAAEIRTGHE IWISSGSLIT AMRASYALPG VFEPVVCNGR VLIDGALVNP VPVTVCRAHE QPLVVAVNLH YDVFGRAAVI RHSADLPEKE GKPLDGEKAP LLVDKGPRRH EMRLGITGVM VEAFNIIQDR ISRARLAGDP PDLSLQPKLG HIGLTEFYRA GEAIDVGYET TKSQLADLER MLSVLT
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