Gene Meso_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1000 
Symbol 
ID4181685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1097132 
End bp1098187 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content63% 
IMG OID638066880 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_673562 
Protein GI110633354 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.344291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGTCG CTCGCGATGG GCCTGCAAAC CGCGGAAGAG GCATGAGCAC GCAAACACCT 
AACCTCGTGG AACTGCGGGA TCTGAAAGTG GCCTTCGATG GCGTTCAGGT CCTGCACGGG
ATCAATCTCG ACGTGGCGCA TGGAGACGCG CTTGGCCTTG TCGGGGAGTC GGGCTGTGGC
AAATCCGTAA CCTGGCTGGC GGCCCTTGGC CTGCTGCCGG GCAAAGCCAG CGTCACCGGC
TCCGTTCGTC TTGGAGGAAT GGAACTTTCC ACCGCGCCAC GGCCGGTCCT TGAGAAAGTG
CGCGGCAAGC GGATTGCGAT GATATTTCAG GATCCGTCGA GCTCGCTCAA TCCGGTCCTG
CGCATCGGCC GGCAGATAAC GGAGGCGCTT GCCATCCATC GCGGCCTGAC CGGCGAGGCT
GCCAGAGCCG AAGCGCTGCG TCTGATGGAT ATGGTGGGTA TCCCCGATCC CAGGCGCCGT
TTCGATCAGT ATTCGCATGA GTTTTCGGGC GGGCAGTGCC AGCGCTTGAT GATCGCCATC
GCGCTTGCCG GCGAGCCCGA TCTCTTGATT GCCGACGAGC CCACGACGGC GCTCGATGCG
ACTATCCAGG CGCAGATCCT CGACCTACTG GCAGAACTGA AGAGGGAGAC CGGCATGGCG
CTGGTTTTCA TCAGCCACGA TCTCGGTGCG GTCTCTCAGG TTTGTGAGAG CGTCTGCGTG
ATGTATGCCG GCCGCATCGT CGAACAGGGC ACGGTCGATC AGCTGTTTTC CGAACCCCGG
CACCCCTATA CGCGGGGCCT GTTCGACGCC ATTCCCCGCC TCCACGGTAC TCGCGAAAGG
CTGATCCCCA TTCCCGGCAC GGTGCCGAAC CCGAGGGAGC TGCCGCGCGG CTGTGCGTTC
TCGCCGCGCT GCCCCAAGGC GAGCAACTTC TGCCACACAA ACAGCCCGCG GCTGCTTCTT
CAGCCCGACG GAAGCAGCCT TGCCTGCGTG CATCCAGTCG AGGTCGCCGG AACCGGCGCG
GGCAAGGCCC GCATTTTCGA AGAAGTGATG CAATGA
 
Protein sequence
MGVARDGPAN RGRGMSTQTP NLVELRDLKV AFDGVQVLHG INLDVAHGDA LGLVGESGCG 
KSVTWLAALG LLPGKASVTG SVRLGGMELS TAPRPVLEKV RGKRIAMIFQ DPSSSLNPVL
RIGRQITEAL AIHRGLTGEA ARAEALRLMD MVGIPDPRRR FDQYSHEFSG GQCQRLMIAI
ALAGEPDLLI ADEPTTALDA TIQAQILDLL AELKRETGMA LVFISHDLGA VSQVCESVCV
MYAGRIVEQG TVDQLFSEPR HPYTRGLFDA IPRLHGTRER LIPIPGTVPN PRELPRGCAF
SPRCPKASNF CHTNSPRLLL QPDGSSLACV HPVEVAGTGA GKARIFEEVM Q