| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0990 |
|---|
| Symbol | |
|---|
| ID | 4181675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 1087552 |
|---|
| End bp | 1089336 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638066870 |
|---|
| Product | exonuclease RecJ |
|---|
| Protein accession | YP_673552 |
|---|
| Protein GI | 110633344 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
|---|
| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGGCG AGAAGCGATA TTTCCTGGGC GTGAGACAGT CCGCGCGGGG TGTGAGCTGG
GAACACCGGC TCGACTCGCG CGGTGAGAAC GTCGCGCTTG GAATTGCGCA GAGCCACGGC
GTGCCTGAGA TCGTGGCGCG CGTGCTCGCA GGCCGCGGCG TCGCGCTTGA GGAGGCGGAA
CGTTTTCTGA CTCCTTCCAT CCGCGACCTG CTGCCCGACC CGGCCGGACT GACCGATATG
GAGAAGGCGG CCCGCCGCAT AGCGGACGCG GTGCATGCCG GGGAGCGCGT GGCGATCTTC
GGAGATTACG ATGTCGACGG CGCGGTCTCC TCTGCCATCC TGAAGCGCTT TCTGGCCCAC
TACGGCGTCA CGGCGGAGAT TTATATCCCC GATCGCCTTT TCGAGGGATA CGGCCCCAAT
CCCGATGCCA TGCGCGAACT GATCCGTCGT GGCGCAAAGC TGATCGTCAC CGTGGACTGC
GGCACCAACA GCGCTCCTTC CATAGCCGCC GCCAATGAAA TGGGCGCGGA AGTCGTCGTG
CTGGATCATC ATCAGGTGGG AGGCGACCTG CCCGAGGCCG TTGCCATCGT GAATCCGAAC
CGCGAGGATG ACCTTTCCGG CCAGGGACAT TTGTGCGCCG CGGGGGTCGT CTTCCTCGCC
CTGGTACAGA CCACCCGCAT CTTGAGGGAG GAGCTGCGCG CCACGCCGCC GCCGGATCTT
CTTTCCATGC TCGATCTGGT GGCGCTTGCC ACAGTCTGCG ATGTGGTGCC GCTGGTCGGC
GTCAACCGCG CATTCGTGGC AAAGGGCCTG CTTGCGGCGC GGCAGATGAG AACGCCGGGC
CTTTCCGCGC TCGCCAGGGT GGCGCGTATC GGTGAACCGC TCAATTGCCA TCACCTGGGT
TTTCTTCTGG GGCCGCGCAT TAATGCTGGC GGGCGCATCG GGAATGCGGC CTTGGGCAGC
CTGCTGCTCG CCACCGTGGA GCCGGGCGAA GCGGAATCGA TCGCCGCCAC GCTCGATCGT
CTGAACCAGG AGCGCCAGGC GATGGAGACG GCCATGCTGG CCGAAGCGCG GGCGGAGGCG
GATGCCGAAC TGATGAGCGG AGATGGACCC GCCGTGCTGG TGACGGCAAG CGACACCTGG
CACCCCGGAA TTGTCGGGCT GATTGCCTCG CGGCTCAAGG ACCACGCGCG CCGGCCCACA
TTTGCGATCG CCTTCGACAT GAATGGCATG GGCACGGGCT CCGGCCGGTC CATTACGGGC
TTTGATCTCG GCCGGCTGGT GCGCGACGCG GTCTCCGAGG GACTTCTCGT CAAAGGCGGC
GGACATGCCA TGGCGGCGGG GATTACGGTC GAGCGGAAGA AGCTCGGCGC CTTGCGTGCA
TTCTTTGAGG AGAAGGCCGC CGGCGCCGTT TCGCTTCTGC GCCAGTCCGA AAGCCTCAGG
ATCGATGCCG CCCTTTCGGC GGAAGGCGCA ACGCTGGAGC TTCTGGAGAC CTTGGAGGCA
GCCGGCCCGT ATGGTTCCGG TCATCCGGCT CCTGTGTTGG CTTTGCCGCG CCATCGGCTG
GCCGATGCGA AACTGGTCGG CAACGGCCAC ATCCGCGCCG ATCTAAGGTC GCTCTCTGGC
GCTCGCCTCC AGGCGATCGC CTTCCGTGCC GCCGAAACGG ATCTGGGGAA TTTTCTTTTC
GCAAGCCGCG GAGCTTCGGT CCATGTGGCC GGAACGCTCG CCGTCAACCA CTGGAATGGC
AGCCGCTCCG TGCAATTCCG CATCACGGAT GCGGCAAGGG ATTAG
|
|---|
| Protein sequence | MSGEKRYFLG VRQSARGVSW EHRLDSRGEN VALGIAQSHG VPEIVARVLA GRGVALEEAE
RFLTPSIRDL LPDPAGLTDM EKAARRIADA VHAGERVAIF GDYDVDGAVS SAILKRFLAH
YGVTAEIYIP DRLFEGYGPN PDAMRELIRR GAKLIVTVDC GTNSAPSIAA ANEMGAEVVV
LDHHQVGGDL PEAVAIVNPN REDDLSGQGH LCAAGVVFLA LVQTTRILRE ELRATPPPDL
LSMLDLVALA TVCDVVPLVG VNRAFVAKGL LAARQMRTPG LSALARVARI GEPLNCHHLG
FLLGPRINAG GRIGNAALGS LLLATVEPGE AESIAATLDR LNQERQAMET AMLAEARAEA
DAELMSGDGP AVLVTASDTW HPGIVGLIAS RLKDHARRPT FAIAFDMNGM GTGSGRSITG
FDLGRLVRDA VSEGLLVKGG GHAMAAGITV ERKKLGALRA FFEEKAAGAV SLLRQSESLR
IDAALSAEGA TLELLETLEA AGPYGSGHPA PVLALPRHRL ADAKLVGNGH IRADLRSLSG
ARLQAIAFRA AETDLGNFLF ASRGASVHVA GTLAVNHWNG SRSVQFRITD AARD
|
|---|
| |