| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0985 |
|---|
| Symbol | |
|---|
| ID | 4181670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1080388 |
|---|
| End bp | 1081776 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638066865 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_673547 |
|---|
| Protein GI | 110633339 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAT CTCGCTTTCA GTTCGTCTGC CAGAATTGCG GAACCGTCCA TGCGCGCTGG
GCCGGGAAAT GCGACGGCTG CGGCGAGTGG AATACGCTTG TCGAGGAAGG CACCGCGAGC
GGTATAGGCA CCGGACCGCA GGCGCTCAGG AAGGCACGCC CCGGGCGGCC CGTCGCGCTT
ACCACGCTTG CCGGCGATAT CGAGGATGCG CCGCGCATCA TCACCGGTAT CGGCGAACTG
GATCGGGCGA CCGGAGGGGG CTTCGTGCGC GGCTCTGCCC TTCTGGTCGG CGGCGATCCG
GGCATCGGCA AATCCACGCT TCTCACGCAG GCGGCCGCGG CACTGGCCTC CAGAGGCCAC
CGCATCGTCT ACGTTTCCGG CGAAGAGGCG GTCGCGCAGA TCAGGTTGCG GGCGCAGCGG
CTCGGCGTGG CGAACACCGC GGTGGAACTG GCTGCGGAAA CCAATGTGGA AAACATCCTT
ACCACCATAG AGGACGGCAA GCGCCCAGAC CTCGTGATCC TCGATTCCAT CCAGACGCTC
TGGACGGACA TGGTGGAATC CGCGCCCGGC ACCGTAACGC AGGTTCGCGC CGCCGCGCAG
GCGATGATTC GCTACGCAAA ATCCACGGGT GCGGCCATCG TGCTCGTCGG CCATGTGACA
AAGGAAGGCC AGATCGCCGG CCCGCGCGTG GTCGAGCACA TGGTGGACGG TGTCCTCTAT
TTCGAGGGTG AAGGCGGGCA CCATTACCGC ATCCTGCGCA CCGTGAAGAA CCGCTTCGGC
CCCACCGACG AGATCGGCGT CTTCGAAATG GGGGATCGGG GCTTGCGCGA GGTGCCGAAC
CCTTCGGAAC TTTTCCTCGG AGAACGCAGC GCCGCCGCGC CGGGAGCTGC CGTTTTTGCC
GGAATCGAAG GGACGCGGCC CGTGCTTGTG GAAATCCAGG CGCTCGTCGC CGCCTCCCCG
CTCGGCACGC CGCGGCGCGC TGTCGTCGGG TGGGACGGCG CCCGGCTTTC CATGGTGCTC
GCCGTGCTAG AGGCCCATTG CGGCGTGCGC TTCTCCACCC ATGACGTGTA TCTGAATGTG
GCGGGCGGAT ACCGCATATC GGAGCCCGCG GCGGACCTGG CGGTGGCGGC CGCGCTCGTC
TCCTCCGTCA CCGGGCTTGC CCTGCCCTCG GATTGCGTCT ATTTCGGCGA AATCAGTCTC
TCGGGTGCGG TCCGGCCCGT TGCGCATGCA GCGAGCCGGC TCAAAGAGGC CGAAAAGCTG
GGCTTCACGC AAGCCGTCAT GCCGCCGGCC AATGAAGAGC TGGCGGGCGG GATTGCAGCC
AACGCTTTCA AACCCGAGGG ATTGGCCGAT CTCGTAGCCC GTATAGCGGG GTCGCGGGTA
CGGGAGTAA
|
|---|
| Protein sequence | MAKSRFQFVC QNCGTVHARW AGKCDGCGEW NTLVEEGTAS GIGTGPQALR KARPGRPVAL
TTLAGDIEDA PRIITGIGEL DRATGGGFVR GSALLVGGDP GIGKSTLLTQ AAAALASRGH
RIVYVSGEEA VAQIRLRAQR LGVANTAVEL AAETNVENIL TTIEDGKRPD LVILDSIQTL
WTDMVESAPG TVTQVRAAAQ AMIRYAKSTG AAIVLVGHVT KEGQIAGPRV VEHMVDGVLY
FEGEGGHHYR ILRTVKNRFG PTDEIGVFEM GDRGLREVPN PSELFLGERS AAAPGAAVFA
GIEGTRPVLV EIQALVAASP LGTPRRAVVG WDGARLSMVL AVLEAHCGVR FSTHDVYLNV
AGGYRISEPA ADLAVAAALV SSVTGLALPS DCVYFGEISL SGAVRPVAHA ASRLKEAEKL
GFTQAVMPPA NEELAGGIAA NAFKPEGLAD LVARIAGSRV RE
|
|---|
| |