| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0972 |
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| Symbol | |
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| ID | 4179764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 1067694 |
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| End bp | 1069334 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638066852 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_673534 |
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| Protein GI | 110633326 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCTCA CTCCGCTTAA AGCGTTGCTT GTCATCGCGG GAGTCTTGGT CGCCGGGGGT
CTCGTTTATT TCACCGGCAT TTTCAATTCG CAGACCGAGC AATCGCAGGC GGTGGTGGAT
TCTCACGCCC CCACAGAGGC TGCGGAAGGC GCAACCGCAA CAGGTGGCGA GCCTGGCGAT
GCTCCGATCG TGGCCGAGGC GGGCGACCAG CGGGCCGCCA CCGACGAGCA GGTGATCGTT
CCTGCCTTCG ATCTCCTGCG CGTTGAGCCT GACGGCTCGC TCGTGATTGC CGGCAGGGCC
GTTGCCGGGG CCGAAGTGGA AATCGTCAGC GGCTCCTCCT TGCTTGCCAA GACGACCGCC
GGTCCCACCG GGGATTTCGC GGCGGTCCTC GACAAGCCGT TAAAACCCGG CGAGCACAAT
ATCGTGCTGC GTGCCACGTC GAAGGACAAT GTGGCCGCGA CGTCCCTTGA AACCGCGATC
GTTTCTGTTC CCACCGCGGA GAATGGCCAG GTGGTCGCTC TCGTCCAGCA GCCGGGCGAG
CCCAGCCGGC TAATCACAAC GCCTGAGGCT GAGGCGCCGC CGTCTGGCGA GACCGCGGGA
TTGGACGAGC GGCAGAAGGA TGCGCCAGCT TCAGGCCAGG ACGGAGCGGT GCAGGCCGGC
GGTGCCACGC AATCGATGGG GCCGGAAAGC GGTGCCGGCA GCATCCCCCA GTCTTCCGAG
ATCGCGGAGG CCAAGCCGGG CGAGACATCC GGCTCGCATG CCAGCGGGGA GGCTGCCCAG
GAAGGCCCGG CTCAGGCGGA AATGCCGTCT GACACGCCGA ACAAGGACGA GCCCTTCATC
GAAGCGGTGG AGATCGACGG GCGGAACGTT TTTGTTGCCG GGCGGGCGGC GCCCGGGCGC
ACGATGCGCA TTTATGCCAA TGACATCCTG CTCGGTCAGG CCACCGTATC GCCGGAGGGT
CGTTTCCTGA TTGAGGCCGA GCGCGATTTG CCGGTGGGGG ACTATATTAT TCGAGCGGAT
GTGCTCGCGG ACGATGAAGG TACGGTAATC GCGCGGGCGG CGGTACCGTT TGAGCGCCAT
GAAGGCGAAA AAATCGCCGC GGTGGCGCCT CGGTCGCTGG CGCAGACGCC CCCCGCGCAG
GGAGCTTCCC ATGCCGGAGA GACGCGGCAG GATGCCCGCG CGGCGGGTGA GGGACTGCCG
GACGGCGCCA CCCGCCCGGA CGCTCGCGAG CTGGCGGAAA CTGGGCCAAA CGCCGGCAAC
GGCAACATGT CCCGGTCCGG CGCTGTTGAA GATCGACTGG GTGACCGGGT CGCGTCGGCC
GGGGGAAACG AATTGCGATC CGATGACCGC AATCTCGGTC GGGATTCCTC TGAAGTCACT
TCGCCGCCTC TTGAGCCGGT GGGCGGCTCC GTCATCATTC GGCGCGGTGA TACGCTCTGG
CAAATCTCGC GCCGTATCTA TGGACGCGGC ATCCGCTACA CCACGATCTA TCTGGCCAAC
CAGAGCCAGA TCCGGGATCC GGACCGGATT TGGCCCGGCC AGGTTTTCAC CGTCCCCAAT
CAGACGCGGG AGGGGGAGCG GGCGGATATG GATGCTGCCG GTGCCGAGGA GCAAAGGGAT
TATTCAACGA GTTCTCGCTG A
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| Protein sequence | MVLTPLKALL VIAGVLVAGG LVYFTGIFNS QTEQSQAVVD SHAPTEAAEG ATATGGEPGD
APIVAEAGDQ RAATDEQVIV PAFDLLRVEP DGSLVIAGRA VAGAEVEIVS GSSLLAKTTA
GPTGDFAAVL DKPLKPGEHN IVLRATSKDN VAATSLETAI VSVPTAENGQ VVALVQQPGE
PSRLITTPEA EAPPSGETAG LDERQKDAPA SGQDGAVQAG GATQSMGPES GAGSIPQSSE
IAEAKPGETS GSHASGEAAQ EGPAQAEMPS DTPNKDEPFI EAVEIDGRNV FVAGRAAPGR
TMRIYANDIL LGQATVSPEG RFLIEAERDL PVGDYIIRAD VLADDEGTVI ARAAVPFERH
EGEKIAAVAP RSLAQTPPAQ GASHAGETRQ DARAAGEGLP DGATRPDARE LAETGPNAGN
GNMSRSGAVE DRLGDRVASA GGNELRSDDR NLGRDSSEVT SPPLEPVGGS VIIRRGDTLW
QISRRIYGRG IRYTTIYLAN QSQIRDPDRI WPGQVFTVPN QTREGERADM DAAGAEEQRD
YSTSSR
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